Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7737  (registered. 2012)
Contig Information
Length 769 bp
Clones alternative view 6 Clones [Download: TSV  ,  FASTA ]
Wh_VHS Shoot with heat shock treatment 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115434560|ref|NP_001042038.1|| Os01g0151200 [Oryza sativa (japonica cultivar-group)]
Score 168
Evalue 7.00E-40
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7737
CCAAGAACTACAATGTTATTATTAGGTTATTACAAGAGGGATAGAGAAAATACAGATTGTACAAAGTACGCAATTCCTGCCCGATATCCGAGCCCGCCTT
ACAGAACAGCACAAGAAAGTTTATGTACCTCTTCTCTACATATACTCTCCTCGGCTGGAACAGGCTTGCCTGATCCATTAACCTCGCAATCCTACCGTAA
CATATTGTGCTGACTGAACCCAACTATTTTCATCTTACAGCTTCCCAGCAAATACCTGCCTGTAGTAAAACTTTTGTCTATCCCCATCTGAAGATCTGGC
CCCCCGTGCAGGTGACCATCAAAATTTGTATCCGAGATCATCAACAGTGGCTCACTGGTCAACTGAATTAACCAGTTTTGACAAAAATGAATTCCAATTA
GGCTTTCTCACGTTACTGCACAATGCGCTTCCTCTTTGACCTCTTGCCCTTCTTTCCAGAGTAAGTAGGGAGCTTCTTGTCGTTGCCGGTAGCGAATGTT
TCCTCTACAGGTCCTCCCTCCTCTGTAGTATCATCATCTGACTCTTCATCCTCTGATGTAGTTGAACCATTTGAATCTCCTGCACCAAGTGCTTTCACAG
CTTTTCTCCTGTTCTCCTCTTCTTTTAGCTGCTTAAACCTTTCTCCACCCTGGCCTGATTGAGCACCTGAACGTTTTGCTCGTCCAGCAGTTATAATTCC
GCTTGCTCCCTCATTCATAGCAGGCTTTGCTCCTCCCAGTTTCCGCAACCATATCTGCTGGCCTCGTGC
page-top