Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig22147  (registered. 2003)
Contig Information
Length 899 bp
Clones 11 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 4
Wh_EMC Dormant seed with cold treatment after water absorption 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_PCDAM Anther at meiosis 2
Wh_SHDr Shoot grown with dessication 2
Homology (BLAST) Top Hit Os01g0184800 [Oryza sativa (japonica cultivar-group)] >gi|9558421|dbj|BAB03357.1| putative phosducin-like 3 [Oryza sativa Japonica Group] >gi|113531767|dbj|BAF04150.1| Os01g0184800 [Oryza sativa (japonica cultivar-group)] >gi|215706965|dbj|BAG93425.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215734886|dbj|BAG95608.1| unnamed protein product [Oryza sativa Japonica Group]
Score 818
Evalue 1.7086e-85
Total Hit Count 192
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig22147
ATATAAGATTACTGGGAACAAAGTTTATACAGAACCTCGTCAAAACAGCTTTCAGGTTTTTCACACACAAACAACCAAATAAGATCAGGAAAGGCAAGAC
TATCCGTAGATCCAAATGATATCACTGAACCAAAACAAAACTAGCAGAAAGGTGTAAATTTTAGTCGCTATCATCTTCGTCTTCTCGCGTTTCAAGCTGG
GAGACAACCTTTTCTATGAACTTCCTGCGAACGCCTTCCATGACATTGTTACCACCTTGTCCATCATTCAGTACTGGGTCTGAGTGGCAAAGCGCCAATG
CAACAGATTCAGGTGTGCATTTCTTTCCACCGAACTTCTGTAGACCAACATAAGTCCCTTTGACAGCACTGTTGTTGTACACCAGTATTGTAGGGACATT
CCTATCTGGGTAGTTGGGAATACAGTCCGTGGAAATAATTTTAACGAACTTGGTTTCTGCATATTTTGTCGCCAGTTCCTCCAGGCAAGTCTCAAGCAGC
CCACATTCTGGTATCGCATCTTTGTAGAGGAAGACCACAACCCAGACATCCGGTGGAGCCTGCGAAACCTCACGCACAAAATCAGAGCCTGTGATGGGTT
GTATTGTGCCAAATCTGGCAGTTTTTGCTGCCTCCTTGAGCTCTGCAAGCCTCATCCTCCTGTACTGCTCGAGGAAGCGGTCATCGTCGAGGTCGTCCTC
GAGCTCCTCGAGCTCGTCGGGGTCGCGCGCGTCGAGCCACTCCTTGGACCTGGGCTGCTCGTCGGCGTCGGCCCTGGGGGCGAAGGGCGGCGGCTTGAAG
GGCGCCGGCTTCTCGGGCAGGTTCCCGAGCTTGCGCTGGATGTCGTCCCACTGCGTGGTCGCCCCCTCCACGTCCTTGTACACGAAGTGGTAATCCGCC
page-top