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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7536  (registered. 2012)
Contig Information
Length 777 bp
Clones alternative view 32 Clones [Download: TSV  ,  FASTA ]
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115477148|ref|NP_001062170.1|| Os08g0502700 [Oryza sativa (japonica cultivar-group)]
Score 476
Evalue 9.00E-133
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7536
CAAGATGGACTACATGAATGGGCCAGGCCGGAACCACCTGTTCGTCCCTGGGCCGGTGAACATCCCGGACCAGGTGATCCGCGCCATGAGCCGGCAGAAC
GAGGACTACCGCTCGCCGGCGATCCCGGCCCTCACCAAGACCCTGCTGGAGGACGTGAAGAAGATCTTCAAGACCACCACCGGCACCCCCTTCCTCTTCC
CCACAACTGGCACCGGCGCCTGGGAGAGCGCGCTCACCAACACGCTCTCCCCGGGGGACCGGATCGTGTCCTTCTCGCTGGGGCAGTTCAGCCTGCTGTG
GATCGACCAGCAGCAGCGCCTCGGCTTCAGCGTGGACGTGGTGGAGTCCGACTGGGGCTACGGCGCCGACCTCGGCGCCCTCGAGTCCAAGCTCCGCACT
GACTCGCAGCACACCATCAAGGCCATCTGCATCGTCCACAACGAGACCGCCACCGGCGTCACCAACGACCTCCACGCCGTCCGCAAGCTCCTCGATGCGT
ACCGGCACCCGGCGCTGCTGCTGGTGGACGGGGTGTCGTCCATCTGCGCGCTGGACTTCCGCATGGACGAGTGGGGCGTGGACGTGGCGCTGACGGGGTC
GCAGAAGGCGCTGTCGCTGCCGACGGGGCTGGGCATCGTGTGCGCCAGCCCCAAGGCGCTGGAGGCGGCCAAGACGGCCAAGTCGGTGCGCGTCTTCTTC
GACTGNNNNNNCTACCTCAAGTTCTACAAGATGGGCACCTACTGGCCCTACACGCCCTCCATCCAGCTCCTCTACGG
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