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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig20610  (registered. 2003)
Contig Information
Length 1470 bp
Clones 8 Clones [Download: TSV  ,  FASTA ]
Wh_EMC Dormant seed with cold treatment after water absorption 3
Wh_SHC Shoot grown with cold treatment 2
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 2
Homology (BLAST) Top Hit Os06g0665000 [Oryza sativa (japonica cultivar-group)] >gi|52076505|dbj|BAD45383.1| LEM3-like [Oryza sativa Japonica Group] >gi|113596342|dbj|BAF20216.1| Os06g0665000 [Oryza sativa (japonica cultivar-group)] >gi|125556387|gb|EAZ01993.1| hypothetical protein OsI_24025 [Oryza sativa Indica Group] >gi|215740850|dbj|BAG97006.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1437
Evalue 5.91044e-157
Total Hit Count 360
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig20610
GGGGGATGATGATGGACGCCGTCGCGGCCGGCACGAGCAACGGCGGATCCGGGGCCGATGGGGACGCCGCCAGGCGGAACAACACCAGGATGCCCAAGTA
TTCCAAGTTCACGCAGCAAGAGCTGCCGGCCTGCAAGCCGATCCTTACTCCAAAATGGGTTGTCTCGGTGTTTTTCCTTGTCGGCGTCGTCTTTGTCCCA
GTTGGTGTCGTTTCGCTACTAGCCGCACAAGATGTTGTTGAGATCATTGATCGGTATGATCATGCATGTGTCCCACCTAACATGACTGATAACAAGCTTG
CGTACATCCAGAATGAGACTATACCCAAAGACTGCACAAGGACTCTCACGGTTACAAAGGAGATGAAACAGCCAATTTATGTGTACTACCAGCTCGATAA
CTTTTATCAGAATCATAGAAGGTATGTGAAGAGCCGAAATGATGCACAGCTAAGAGATTATAAGAAGTCAAATACGACAACCTCATGTGACCCTGAGAGG
TTCACGGCTGATGGAAAACCAATTGTTCCCTGTGGTCTGATTGCTTGGAGTTTGTTTAATGACACATATAGCTTCACTCGTGGTAAAGACAACTTGACAG
TAAACAAGAAGGACATCTCCTGGAAAAGTGATAGGGAGCACAAATTTGCCAAAAATGTCTACCCAAGCAACTTCCAGAATGGTGCGCTCATAGGTGGAAA
GAAGCTTAACTCGAGTATCCCGCTGAGCGAACAGGAGGATCTTATTGTTTGGATGCGGACTGCAGCGCTTCCTACATTCAGAAAGTTATATGGGAGGATA
TACGTTGATCTCAAGGCGAATGATACCATAACAGTGAGGCTGAGTAACAACTACAATACATATAGCTTCGGTGGCAAGAAGAAGTTGGTCCTTTCCACTG
CAACCTGGCTTGGAGGAAAGAATGATTTTCTTGGATTTGCATACCTCATAGTTGGTGGACTCTGTATTTTCTTGGCATTTGCATTCACCTTGCTATACTT
GATAAAGCCAAGGAAACTGGGAGATCACAACTACCTGTCCTGGAACAGGCACCCCGCAGGCCGCTAAGGGTGTTTCCGAACTCGATATGGCGTACAATTG
ATGCCCGCCTCGACTACGTGAAATGTATCATCATGCCCTACATGATACCTGAGATTGCCAGTAGCTCTAGACCACTTGTGTGTGTACATTTTAACAAACG
GATCTATCTATGTTCTTTTGTTTGTTGTGGTAGGGGCATGCATACAACAGCCGATCTTTGTTGTTGGGTACTACGGATTGTATTACTACCTCTGATCCAT
AATAAGTGTTGCAGTTTTGAACTAGTCCCAGTTCGAAACTGCGACACTTACTCTGGATCGGAGGGAGTATCAAGTTTCTCATTTCGTGGTATGGATTTAT
TAACCATTCTGTAATGTACTGTAATAGTTTATTGACCCTATGAGATTCCAGACAATGCATGAATGCCTGG
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