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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7393  (registered. 2012)
Contig Information
Length 2196 bp
Clones alternative view 165 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 11
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 5
Wh_oh Pistil at heading date 2
Wh_r Root 3
Wh_yd Spikelet at late flowering 4
Wh_CSEC Callus 10
Wh_DPA20 Seed DPA20 8
Wh_EM Dormant seed with water absorption 6
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 5
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 4
Wh_VSCB Liquid cultured tissue 6
Wh_VWD Shoot grown with dessication 8
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 7
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 8
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 4
WH_XA Root 3
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XE Seedling, infected with leaf rust 8
WH_XF Seedling, infected with leaf rust 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115477865|ref|NP_001062528.1|| Os08g0564100 [Oryza sativa (japonica cultivar-group)]
Score 1098
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7393
TTTTTTTTTTGAATGAAATATGTCTACATCTCATCACCTTATAAAATGATAATCTTCAAATCTAGAACCACAGAGCAAAACAAACCATCATGGATCAACA
ATGTTAAAGATATGAAATTAAATACGGATCGTCTGGTTATAAAATAGCGTAGAGAAGATATGTTTTAAGTGATACAATAGTACTTGTACTTGTCGCGCTA
AATGATGGAAGCTTTTCTGATACAGAGGCAAAACTTTGGGTTGTCTAGATCTCCAAAGAGCCGAGAGAAGGAAAAGACAGGAAATCTAGAGACCAGCCCT
TTTCTTCAAGTGTTGCTTGAAATCCATGATATCGCCTTCCCACCTAGTCACCGCCTGGTTCTCACAGACCCAGATCTCTTGAGCAACCTGATTGATCAGC
CTGAAGTCATGGCTCACCAGGACCAACCCCCCGTCCCATTCCTTCAATGCCTCAGCAAGTGAGTCAATGGTCTCAATGTCAAGATGATTTGTCGGCTCAT
CAAGCAACAGCATCTGTGGCTGCCTAAATGCTAGCCAAGCAAAAATGACACGGGCCTTCTGCCCATCAGACAGGTTTTTCATTGGCATCACCTGTGCCTT
TCCTGACAGGCCAAACTTGCCAATTGCAGCTCTCATCTTCTCCTCTTCATTCCCAGGGTACTCCCTCATCATGTACTGCAGGGCCGGCATGTCCAGGTCC
AGCTTCTCAGTGAGATGTTGATGGAATTGTGCAATGCGTAGGTGGTTGTGGCGTCTGACCATGCCATCCAACGGAGATAGGTCACCTGTCATGAGCTTCA
GAAGTGTGCTCTTACCTGCCCCATTGGGACCGACCAGTGCAACTCTCGAGTCAAGGTCAACACCAAAGTCAAGGTTCTTGTAGATGAGATTATCCGGACT
GTAACCAAATGTGACATCAGCAAACTGCAGCACTGGTGGTGGGAGTTTGCCAACATCTGTAAAGCGGAAAACAAGAATCCTGTCATTGACAACCTTCTCA
GCGAGACCACCACGCTCCATCTTTGCAAGAGTCTTCTCCTTGCTCTGAGCCTGACGAGCAAGCTTCGCAGATCCATGACCAAATCGTGCAATGTACTCCT
TCATATTAGCTATCTGTTCCTGTTCCCATTTGTACTGCTTCATTTGATTCTCTTCAAGCTCAGAGCGAGTTTGAACATACTGGTCATAATTTCCAGTATA
TAACTTGAGGGTCTTGTTCTGCATGTGGATGATGTTAGTGCACACTCCATTTAGAAAATCTTGGGAATGCGAGATAACAACAAGTATACGCTCAAAGTTC
TTTAATTTCTCTTCCAGCCAGACACAAGCCTCAAGATCAAGATGGTTGGTTGGCTCATCAAGCAAAAGGATGGTCGGGTTCATGAACAGCGCCCTTGCCA
ATGCAATCCTCATACGCCAACCCCCAGAAAAATCTCGTGTTGGCTTTGCTTGCATTTGCTTGTCAAAACCTAGACCAAACAATATCTCAGCAGCACGCTT
TTCAGCAGTTGATGCATCCATTGCTTCTAACCGCTCATATACAAGATCCAAAGCTTCACCGCCACCATCATCCTGTGCAGCCAAAATTTCAGCTTCCTTT
TCCAACTTCACTCTTTCTTCATCACAACAGATAACAGCTTGCAGCGCAGACATGTCAGAAGCCTCAATCTCACGAGTAAGATGATGTATGTCCATGTGTT
CAGGAATGGGGAGTTCCCTGCAGCCTATTGCGGTGAGAAGGGTAGATTTCCCACAACCATTTAAGCCGAGCAAACCATACCGCCTCCCGTAGTTAAGCTC
CAATTCTGAATCCACAATAAGGTCATGTCCATGAAATGTTAATGAAAGGGACTCAATGTGGATATCACGGGAGAGCGGATGCGAAGCCAGGACCCCGGTA
CATGTCCGATCGGATAAGTTAAGGGCCGCTATGCCATTGGCGGCCTTATCGGCCGCTGACGACGCCGACGAGGACGAGGCAGCGGCGCTGGACTTGGCTC
CCCTCTTTGCGGCGGCGGCGGCCTTCTTCTGCGCGGCTTTCTTCTTGCTGGCATCGGACACCATGGTAGGAGATCGGGATCGGGATAGTTAGATAGCTCG
AGGGTTGGGGATTGGTTGCTGGAGACGGCGATTCGCGCAACCCTACGATACACACGATTTCTATTCCCCTCCGTGCCGAATTCCTGCAGCCCGGGG
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