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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7352  (registered. 2012)
Contig Information
Length 1744 bp
Clones alternative view 115 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 1
Wh_f Spike at flowering date 3
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 2
Wh_SH - 2
Wh_KMP Shoot grown under continuous light 6
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 8
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 11
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 10
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 2
WH_XB Root 1
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 6
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115470235|ref|NP_001058716.1|| Os07g0108300 [Oryza sativa (japonica cultivar-group)]
Score 900
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7352
TTTTTTTTTTGTAAGCTCAAAGGTTGTTTAATTATTTATTATGGATCAATTATTGGAGCCAACAATTACAGTATCATCATATTATGTAGTAAATGGACCG
AATATTTCCGCATATATCTTCCCCCCTATACATATCAAGCATAGCAACCAGTTTTCTTCACCATAGTTACAGCTTACAGCTAATTAATCAACTTTAATTG
CTGGTAGAAAAGAGCAGCATTGTATTATATGTAGATGCGGTTGTCTTCTTCTCTCTTCACAGCCTCGAGTGGTCCTGGTATTGCTCCATGAACGAGTCGT
TGAACTTCTTGAAGCTCGACATGATCGCCGGCATGTCCTCCTCCGCGGGCAGGATCGTCGTCCTCAGATGGAACACCCCTTCTTTCTGACCAAAACCTGA
GCCTGGAACAGTGGAAATTCCAGTGGCTTCCAGAAGCTTGAGGCAGTAGTAAACATCGGGCGCTTTGCCAGCGCTTTTTGCTACATCCATAGCTCTTTGC
GGCAGCCGTATTTGCGGGAAAGAATACATAGCTCCTTCTGTGAAATTGCAGACAACATTTCGGCAACTATTGAAACCGTCTGTCATTATTTGTGCCCTCC
TCCTTAAAGATTCAAGGATAGACTTACTTTCAGCAGAGTACTTCAGGTACGAGATGTCTCCAGGTTTAGGAGGGTTCACCATAAGCCCCATAAAGATCTG
CCCAGGAACATTTGGACTCAGCGCGATTGATGCAACCTTGTAAATCTCGTCGACAGTCTTGGGAGGAATATTTGTCATTTCAAAGTACCCACCACGTTGT
CCACACTCTCCCCAATATCCTTTGGACACAGTATGGAAAGAAATCAGCTGAACTTCCCTGCTTACTGGAGGACCCATGTCAAACATAACCTTTCTTGCAC
TTATAAACGGACGCTCATCTTGATAAACATTCTGTTGATAAACTTCATCTGCAAGCAGAACCAAGTTTTCCTGATAGCAGAAGTTCAAAAGTTCCCTAAT
ATTTGCTTCACTTAGGCATTGACCAGTAGGGTTTCCTGGGTTTATTATCACCATTGCTCGAACAGTGATTCCCTTTGACCGTGCTTCTGCAACTGATTGC
CGGGTACTGACAAGATCAAGTCCCCAGTTAGCCTCTTCTTCCAAATAATACGGGACAAGAGAACCACCAAAGAGGGAAATAGCAGCAGAATAAAGCGGGT
ATTGTGGAACAGGGACCAAAATCCCGTCCCTCTCGTTTCTGATAATGGCGTTGAGCATTTGCATCACACCTTTGCTGGCACCATCAGTGAGGTAAATAAG
CTCTGGATCACTTGGATACCCATCACGCCTCTGAATGAACTCGGCAACTTCCTGCCTAACCCCAGGGATACCTCGGGAGTCACTGTAAGCACCTAAACCG
CCGGGCGCGAGGGAGAGGTAGTGCTTGGCCCTCGCGATGGCATCGGCGGGGAAGATGAGGCCGACGTTGGGATCATCGAGCAGGAAGGGAGCCTGGCAGA
GCGCCACCACCTGGCGGGGGAAGGTGAGTGGCTTCTGGCCGAGGGCGTGCGGGTTGCCGACGTTGGTGAAGATGATCCTCTTGCCCTCCTTCTGGAGCTC
GGAGGCGCGGAGGTAGAGCTCCCCGCGCACGGCGTACTGCACCTTCTTGACGTTCTCGTTGAGCTCCTCGTAGTCCAGGGCCTTCCTCCCCATCATCTTC
TCGTCTTCTCCAGATCCCTCGTGCGCCGCCGCAGAGGGGAAAGG
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