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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6899  (registered. 2012)
Contig Information
Length 1147 bp
Clones alternative view 513 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 3
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 10
Wh_h Spike at heading date 6
Wh_SH - 17
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 9
Wh_KMV Shoot grown with continuous light after cold treatment 7
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 7
Wh_SHDr Shoot grown with dessication 3
Wh_V4816 Shoot grown under cold condition for 16days 23
Wh_V483 Shoot grown under cold condition for 3days 35
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 24
Wh_VWD Shoot grown with dessication 28
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 22
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 35
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 21
WH_XN Leaves, plant was grown at constant 23Ž 31
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 34
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 46
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_SP 2
WH_XE Seedling, infected with leaf rust 17
WH_XF Seedling, infected with leaf rust 15
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 40
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 36
WH_XV Leaves, plant was grown at constant 23Ž 5
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 8
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 11
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115444841|ref|NP_001046200.1|| Os02g0197600 [Oryza sativa (japonica cultivar-group)]
Score 497
Evalue 9.00E-139
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6899
GTGCAGACAGAGAGGAAATCACACTATCAACTGAAACACCAAGAATTTCAGTGTTTATCTTCTCGAACTCCTCCCACACACCACGCCTGCCTCATCTCTC
GGAGCAGCAGCAGGAGGAGCTTGCAGGAACAATGGCGGCCCAGGGTCTTCTCTCTGGGAGGCAGCTGCTTGGGAGGCCTCTGCAGTCTTCCATCTCCAGG
TCGTCTTCCTCCCGGAAGTCCGCCTTCGTCGTCAGGGCATCGTCCAGCCCCCCTGCCAAGCAAAATGACAACAGGCAGCTGTGGTTCGCGTCCAAGCAGT
CCCTCACCTACCTGGACGGCACGCTGCCCGGTGACTTTGGCTTCGACCCCTTGGGGCTGTCCGACCCGGAGGGCACCGGCGGGTTCATCGAGCCCAGGTG
GCTGGCCTACGGCGAGATCTTCAACGGCCGGACGGCGATGATGGGCGTGGTGGGCATGATCGCCCCGGAGGCCCTGGGCAAGGTGGGCCTGGTGCCCCCG
GAGACGGCGATCCCGTGGTTCCAGGCCGGCGCGATCCCGCCAGCGGGCACCTACCAGTACTGGGCCGACCCCTACACGCTCTTCGTGTTCGAGATGGCGC
TCATCGGCTTCGCGGAGCACCGGCGGCTCCAGGACTGGTACAACCCGGGCTCCATGGGGAAGCAGTACTTCCTGGGCCTCGAGAAGTACCTCGGTGGCTC
CGGCGACCCCGCCTACCCCGGCGGGCCCATCTTCAACCCGCTCGGGTTCGGCACCAAGAGCGAGAAGGAGATGAAGGAGCTCAAGCTCAAGGAGATCAAG
AACGGCCGCCTCGCCATGCTCGCCTTCCTCGGCATGTCTCTGCAGGCCATCTTCACCGGCGTCGGACCCTTCCAGAACCTCCTCGACCACCTCTCCGACC
CCGTCAACAACAACATCCTCACCAGCCTCAAGTTCCACTAGGCGAAATCCATCCGATCCGATCCGAGCATCGTCGTCCTGTGCATGGTACCCGTCGTCGT
GGGAAACGTGAGCGTGCGAGAGGTATATATGCGAGGGTGGGTGTAAAATGTAAATTTGTACGCGTGCTGCGTGCATGCTTGTAATATTTATATCGTGCTA
TGAAAATTAGTGCATTGCATCTCTCAAAAAAAAAACCAAAAAAAAAA
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