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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6815  (registered. 2012)
Contig Information
Length 1337 bp
Clones alternative view 204 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_yd Spikelet at late flowering 2
Wh_SH - 17
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 10
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 18
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 20
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 7
WH_XN Leaves, plant was grown at constant 23Ž 21
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 16
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 4
WH_XE Seedling, infected with leaf rust 14
WH_XF Seedling, infected with leaf rust 21
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XV Leaves, plant was grown at constant 23Ž 7
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 5
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 7
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|548605|sp|P36886.1|PSAK_HORVU|PSAK_HORVU RecName: Full=Photosystem I reaction center subunit psaK,"
Score 241
Evalue 1.00E-61
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6815
GCTCGCCATCGGAGGAGCATATGCAGTTGCCATCTCGATCTCCTCTTTCTATAGCACATTTTTTTTTTCACCATGTGAAAGATACTATAGATGATGAAAA
ACGCATGGGATGAAGGAGTTGCCACACCGGCGCGGCGGTACGTCCCGCTGAAACAAAGATGCATACACATACATTGTACTACACCACATGATCAAATCAC
GAAGGGAGCATTAATTGATCCACTACATGGAGCGCGCGATGCGAATGCAGAACAGCTATGGACGGAAAAGGAAGGTTCTAGCCGATGATCTGGTCGAGGA
CGCCGGTGTTCTTGAGGCCGAGCACGATGCCGACGCCCAAGATGTGGCCGAAGGAGCCGCATGCGAGCGTGTCGGCGAGCGTGAAGCCGGCCGGGTCGCC
CGTCTGCAGCCCGGACTCGCGCGCCTCCAACTTGAGCCCCGCCGTAGCCTTCCTGTTCGCCGACGGCGCCAGCCCGAACCGCCCGGCGAACAGCATCAGG
GTCGTCGTCGTCACCATGATGATGTTGGTGGAGGAGCCGATGTAGTCGCAGCGGATGCCCTGGGACCTCTTCCTCAAGGACGGCAGCGTGGCTATGGACC
TGGGCGAGGAGTAGCTCCTGAGGCCGTGGAACTGCGGCACGGAGGTCATGGCGGAGAGCTGGGAGGCCATGGCTGCGGATTTGTGTGCTGTGGATGCTGC
GATCGATCCTCCCGCGTGCCAAGCCACCGACCAACATGGCAGCGTCTCTCCAAGCCGCGGCTACGCTGATGCCGGCCAAGATCGGCGGCCGGGCCTCCTC
CGCGCGGCCGTCGTCGCACGTCGCCCGGGCGTTCGGCGTCGACGCTGGCGCCAGGATCACCTGCTCCCTGCAGTCCGACATCAGGGAGGTCGCAAGGAGA
ACGTGAAGAACGCGTCCTCCTCCACAGGCAACATCACGCTCAGCGTGACCAAGAGCAAGCCGGAGACCGGCGAGGTGATCGGCGTCTTCGAGAGCGTGCA
GCCGTCAGACACCGACCTCGGCGCCAAGGCGCCCAAGGATGTCAAGATCCAGGGTGTGTGGTACGCGCAGCTCGAGTCTAACTAGAGCAGAGCAGAAGTG
AAGATGCTCATCTTGTGTGCATGCGTACGTGGGTTGATCGTTGGAGAGGAAACAATCGAGGCAACAATGTGTGTTTGTGTGTGTATCTAGTAATCTAAAC
CCAGGGTGTCGGTTTATATTTTAGCTTCTGTTATTGTTTCTTCCTCGCCAACTCATGATATTGACCCTCCATGAATGTTCACAAAATTATTTGTTGACAA
AAAAAAAATTTAGTGATGCAAGTATGACCAACTTTAA
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