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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6663  (registered. 2012)
Contig Information
Length 1012 bp
Clones alternative view 30 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 2
Wh_OKCS Seed DPA5 3
Wh_V4816 Shoot grown under cold condition for 16days 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 3
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XA Root 4
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242092470|ref|XP_002436725.1|| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Score 371
Evalue 8.00E-101
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6663 
AGTCTGATCTGCAGCACCTGAAATCACTCCAGAAACCTTTTCCTGAATATCGTAGCACTCCCGAGACAAAATCGCCCTCGCGTTAGGTTAGGGCGAGGCG
AGAGTAGATTGGATTTCGAGCTCAGCACGCGGCGGCCATGGAGGACGAGGAGCACGAGGTGTACGGCCAGGAGATCCCCGTCGACGGCGAGGACGTCGAC
ATGGGCGCCGGGGGCGACGACGCCGCCAAGCTGCACGAGCTCGACGAGATGAAGCGCCGTCTCAAGGAGATGGAGGAGGAGGCCGCTGCCCTCCGCGAGA
TGCAGGCCAAGGTCGCCAAGGAGATGCAAGGCGGAGATCCTAACGCGACCACATCTGAAGCAAAAGAAGAGATGGATTCTCGTTCTGTTTTTGTTGGAAA
TGTTGACTATGCATGCACTCCAGAAGAAGTGCAGCAGCATTTTAATTCCTGCGGAACCGTCAACCGAGTGACTATCCTGACTGACAAGTTTGGGCAGCCT
AAAGGTTTTGCTTATGTTGAATTTGTTGAAGCAGAAGCTATCCAGGAAGCTGTCAAGCTGAGTGAGTCAGAGCTTCATGGTCGGCAAATCAAGGTAGCAC
CGAAGCGAACTAACGTTCCTGGGTTGAAGCAGCCCCGAGGGGGCCGAGGATTCAACCCATATGGCGGCCACCCCTACATGAGGCCATATCCTCCACCGTT
TTACAATCCTTATGGTGGTTATGGGAGAGCTCCCAGGTTCCGCCGTCCGCGCAGGCCTTTCTACTAAGTTGTGGCTCTACTGGAGTTCTGTCAACACATG
ACAACACTAGTCTTCGATCGATCTCAAGCCAGTCAGAGAACTCAAATCCTTACACCGTGTTTCATTATTTCACAGAAGGATATGTGATGGTTGTTGTGTA
ATCTACTGTGTTGTGTTGAAAAATGTTTAAGCCACTACATGCATCAGCATTATGTACTATTTGACTTTAGTAATCAAGTCATACGACATACTATGCCTGA
ACTGTATTATAT
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