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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6527  (registered. 2012)
Contig Information
Length 943 bp
Clones alternative view 382 Clones [Download: TSV  ,  FASTA ]
Wh_SH - 29
Wh_KMV Shoot grown with continuous light after cold treatment 8
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 14
Wh_V483 Shoot grown under cold condition for 3days 8
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 5
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 12
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 11
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 45
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 9
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 15
WH_XE Seedling, infected with leaf rust 11
WH_XF Seedling, infected with leaf rust 19
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 68
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 71
WH_XV Leaves, plant was grown at constant 23Ž 18
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 7
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 16
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242053513|ref|XP_002455902.1|| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
Score 453
Evalue 1.00E-125
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6527
TTTTTTTTTTAGCAAACCCGAACAATTAATGTCCACTCTTTTTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGACGGG
CCCTATTTGTAAACATCTTTGATAGTGTACAACATCAACGATCAGATATTAATCATACATCCAGAGTACACATATACTCCTGAGAAGTCGATTTTCATGT
GTTTACTTGCCGGGCACAAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTGACAGGGTCGGCGAGGTGGTCAGCGAGGTTCTCCAGCGGACCCTTACCAG
TGACGATGGCCTGCACAAAGTATCCAAACATGGAGAACATTGCAAGGCGGCCGTTCTTGATTTCCTTCACCTTGAGCTCAGCAAACGCCTCCGGGTCGTC
GGCTAGGCCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACGATCTCCCCGAGCGGGCCACCGGCGACGCGGTACCCCTCGACGGCGCCCATG
AGCACGACCTGGCAAGCCCAGATGGCAAGGATGCTTTGAGCGTGGACCAAGCTAGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGC
CCGCCTTGAACCAGACTGCCTCGCCGAACTTGACGCCGTTGCGAGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTG
GATTACCTCGAGCTCGCGGTTCTTGGCGAAGGTCTCCGGGTCGGCGGAGAGGCCCGCGGTGTCCCACCCGTAGTCGCCCGGGAACTCGCCGCTGAGGTAG
CTCGGGGGCTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGGGCCGTACCACGGGCTGTTGGAAACAGCGTCCGCTACGCTGATGTGAAACCTGT
CAAGACTGCNNNNACAGCGCCGCAATGGATGCAGTCAGCCATG
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