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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6438  (registered. 2012)
Contig Information
Length 901 bp
Clones alternative view 198 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 8
Wh_yd Spikelet at late flowering 2
Wh_SH - 5
Wh_KMP Shoot grown under continuous light 9
Wh_KMV Shoot grown with continuous light after cold treatment 5
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 9
Wh_VABA Shoot with ABA treatment 13
Wh_VHS Shoot with heat shock treatment 17
Wh_VWD Shoot grown with dessication 7
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 8
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 13
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 13
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 17
WH_CA 2
WH_SP 2
WH_XE Seedling, infected with leaf rust 14
WH_XF Seedling, infected with leaf rust 11
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 14
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|22204118|gb|AAM92707.1|| putative glycine decarboxylase subunit [Triticum aestivum]
Score 307
Evalue 9.00E-82
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6438
GCACGAGGCCTCTTTCCACTACTACCACCGAGCCACCATCCCCTACAAGGGAGAGCAGAGAACACACATTCACTTTGTTGCTTCAGGTTGCAACACCTAA
ATTAGGCTACAATGGCTCTGAGGCTGTGGGCGAGCTCAGCTGCCAATGCCCTCAAGATTTCAAGCAGCGGCGCCAGGGCTGCTGCCCCGGCCTATTCGAT
CTCCAGATACTTCTCCACTGTTATTGATGGCTTGAAGTACACTTCCTCCCACGAGTGGGTCAAGAACGACGGCTCCGTGGCCACGATTGGCATCAGTGAC
CACGCCCAGGGCCATCTCGGGGAGGTGGTGTTCGTGGAGCTGCCGGAGGCCGGCACGAAGGTGAGCCAGGGCGGAGCCTTCGGCAACGTGGAGAGTGTGA
AGGCCACCAGCGACGTCAACTCGCCCATCTCCGGCGAGGTCGTCGAGGTCAACTCAAAGCTGTCCGAGACCCCCGGCCTTATCAACTCGAGCCCGTACGA
GGAGGGGTGGATGATCAAGGTGAAGCCGAGCAGCCCGGCGGAGCTGGAGGGCCTGCTGGACTCGGCCAAGTACACCAAGCACTGCGAGGAGGAGGACGCC
CACTAGTGCTCCTTGCTCGATTATCGTTCCTTTTTTGTTGCAACCATGTCGACTACTCTTGTCTACAATAATTAAACCAGCTTCACCATGCGTTCAGTTC
ATCGGTTCCAGTTTTCTTTTGTCGTTGTACATGGCGTCCAGCAGTTTGTTATACCATTTCAGTGACCGTGACATCAGATATATGGGAAAGAGTTTGTATG
TTAGTTTGTTGGTAAAAACAGACATTATCATCCACCAACAGATCATCATGTAACTACTCTAATATGGTTTATCTAAAAAAAAAATTTTTTCAAAAAAAAA
A
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