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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6061  (registered. 2012)
Contig Information
Length 1608 bp
Clones alternative view 84 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 7
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 4
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 2
Wh_r Root 3
Wh_yd Spikelet at late flowering 7
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 4
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 4
Wh_VHS Shoot with heat shock treatment 1
Wh_VWD Shoot grown with dessication 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XA Root 5
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|6015054|sp|Q40034.1|EF1A2_HORVU|EF1A2_HORVU RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 882
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6061
TTCGGCACGAGGCGCCGCCGCAGGCTTTGACTCCATCGCCTCTCCCTCCTCTTCGTCTCCGGCCGGCCAGGTAGTTAACAGCTCCAGCAGCCATGGGGAA
GGAGAAGATCCACATCAGCATTGTGGTCATTGGCCATGTCGACTCTGGCAAGTCAACCACGACCGGCCACCTCATCTACAAGCTTGGAGGCATTGACAAG
CGTGTGATCGAGAGGTTTGAGAAGGAAGCCGCTGAGATGAACAAGAGGTCTTTCAAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAGAGGG
GTATCACCATAGATATTGCTCTGTGGAAGTTCGAGACCACCAAGTACTCGTGCACTGTCATTGATGCTCCTGGTCACCGTGATTTCATCAAGAACATGAT
CACTGGGACCTCCCAGGCTGATTGTGCTGTGCTTATCATTGACTCCACCACTGGTGGTTTTGAGGCTGGTATCTCCAAGGATGGCCAGACCCGTGAGCAT
GCTCTCCTTGCTTTCACTCTTGGTGTGAAACAGATGATCTGCTGCTGTAACAAGATGGATGCCACCACTCCCAAGTACTCGAAGGCCCGTTATGAAGAAA
TTGTCAAGGAAGTCTCTTCATACCTGAAGAAGGTCGGTTACAACCCTGACAAGGTTCCCTTCGTTCCCATCTCTGGGTTCGAGGGCGACAACATGATTGA
GAGGTCCACCAACCTTGACTGGTACAAGGGCCCCACCCTTCTTGAGGCCCTGGACCAGATCAATGAGCCCAAGAGGCCCTCCGACAAGCCCCTGCGTCTT
CCCCTTCAGGACGTGTACAAGATTGGCGGCATTGGAACTGTGCCAGTGGGGCGTGTTGAGACTGGAGTCATCAAGCCAGGCATGGTTGTCACCTTTGGTC
CTACTGGCCTGACCACTGAGGTGAAGTCTGTGGAGATGCACCACGAGTCTCTCCTGGAGGCGCTTCCTGGTGACAACGTCGGCTTCAACGTCAAGAATGT
GGCTGTCAAGGATCTCAAGCGTGGGTACGTCGCTTCCAACTCCAAGGACGACCCTGCCAAGGAGGCTGCCAACTTCACCGCCCAGGTCATCATCATGAAC
CACCCTGGCCAGATCAGCAACGGCTATGCCCCAGTGCTGGACTGCCACACGTCCCACATCGCTGTCAAGTTTGCTGAGATCCAGACCAAGATCGACCGGC
GGTCTGGCAAGGAGATTGAGGCGGCGCCCAAGTTCCTCAAGAACGGTGATGCCGGGTTCGTCAAGATGATCCCCACCAAGCCCATGGTGGTGGAGACCTT
CGCTCAGTACCCTCCCCTGGGCCGCTTTGCTGTGCGTGACATGAGGCAGACGGTTGCGGTGGGCGTTATCAAGGCCGTGGAGAAGAAGGATCCGACCGGC
GCCAAGGTGACCAAGGCTGCGGCCAAGAAGAAATGAGATGGTGTCAGGTTCTTTACTGCATCTATGATGGTGGTGGCGGTGACGGCATTTGGTGGTGGTG
ATAGTTGTTCTAGTCGTTTTGAAAACTTGTTAAGCTTTGGTTATTTGTGTCGAGCAGTGTTGGAACTGCTTATTGCTCTGGTCATTGTATCGTTCGGTTG
TGTTGGTG
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