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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6008  (registered. 2012)
Contig Information
Length 1042 bp
Clones alternative view 145 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 25
Wh_dL Crown of seedling 9
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 6
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 7
Wh_yd Spikelet at late flowering 6
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 8
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VSCB Liquid cultured tissue 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23℃ 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_CA 1
WH_SP 2
WH_XA Root 4
WH_XB Root 9
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 3
WH_XV Leaves, plant was grown at constant 23℃ 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|7711024|emb|CAB90214.1|| putative elongation factor 1 beta [Hordeum vulgare subsp. vulgare]
Score 444
Evalue 6.00E-123
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6008
AGGCATCTAAGGGAGAAAAGTAGGCGAGTACACACAAGTAGCTCCGATGAAGACGGCAGACAGAAGAGAATAGCAACAGGAATCCAACCACATTGTCTCA
TTTCATACGAAGCAAATAACACTCAGTAGTAATACTACGAATCAACTCGATCTAAGGTCCAAAAACCTCACAGGGCAGATATGTTATGCTTGCTTTAGCT
ACGACACCATCACGGCAACAGAAAACTGTAGATATATTGTGCGCCCACCGCCATCACCTGCCTCAGGAAGATTTAGATTTTGTTGAAGGCAACAATGTCA
CAGCTCTGGATGTACTCGTTGGCTGGTTCAACGCAGAGATGGTCTTCAATAAGAGTGTCGACAGAGACGAGGTCATCAATGATGGTCATCATAATCTGGA
GCTTCTTGATGCCATATCCAACGGGCATGAGCTTGGAAGCACCCCACAGAAGGCCCTCCATCTTGATGCTTCGGACAGCTTCCTCCAGCTTGACCATGTC
GGTCTCATCGTCCCATGGCTTAACATCAAGCAAAACTGATGACTTGCCAGATTCTTTCTTCTTGGTAGAAGCCTTTGCTTTGGCAGCGCGCTCTTCAGCT
GCCTTTTTCTCCTCCTCGGTTTCCTCTCCAAAAAGGTCAACATCGCTGTCATCGTCATCATCAGCTGCAGGAGCCTCAGCAACATCAGTAGTTGAGGTTT
CAGGGACAACTGATGACAGAACCTTCACACCTTGACCAGGGGCAGTAACTCCACTCAGCTTCAGGAGTGCATCAATGTGATTGTACCACCTTGCAACATT
GGTGCAAGTTGATGGTGGAGCAACTGAGAACTCTGAATACACAGCCAAGTCATCCTTGGAAGCTTGGTATCCAGAGATGTAACTGCGAGACAGAAGGTAG
CCATCAAGCTTTTTAAGGCCTGCCTCAGCATTAACATTGAAGGTAGCCGCCATCTCAGCCTCAAAAGGATGGAACAGATGATCTACTCGAGGGAGCGAGT
CGAGGTGTGGCCGCGGGGAGGCGAGGAGGACCTCGTGCCGAA
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