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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5987  (registered. 2012)
Contig Information
Length 888 bp
Clones alternative view 206 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 9
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 7
Wh_oh Pistil at heading date 1
Wh_r Root 4
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 8
Wh_DPA20 Seed DPA20 7
Wh_EM Dormant seed with water absorption 6
Wh_EMI Dormant seed with water absorption after breaking 11
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 5
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 13
Wh_SHC Shoot grown with cold treatment 12
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 5
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 7
WH_XA Root 3
WH_XB Root 10
WH_XC Root, treated at 50 microM Al for 6h 13
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|6015054|sp|Q40034.1|EF1A2_HORVU|EF1A2_HORVU RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 410
Evalue 8.00E-113
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5987
TTTTTTTTTTAGACGAAAAACATGATCTTTTGATATAAAACGACTCCAAACATGCCAACTATATATAGTAGCAACATTAACTGACGAAGTTTCACCAACA
CAACCGAACGATACAATGACAGAGCAATAAGCAGTTCCAACACTGCTCGACACAAATAACCGAAGCTTAACAAGTTTCCAAAACAACTAGAACAACTATC
ACCACCACCAAATACCGCCACCGCCACCATAGATGCAGTAAAGAACCTGACACCATCTCATTTCTTCTTGGCCGCAGCCTTGGTCACCTTGGCACCGGTC
GGATCCTTCTTCTCCACAGCCTTGATAACACCCACGGCAACCGTCTGCCTCATGTCACGCACAGCAAAGCGGCCCAGGGGAGGGTACTGGGCAAAGGTCT
CCACCACCATGGGCTTGGTGGGGATCATCTTGACGAACCCAGCATCACCGTTCTTGAGGAACTTGGGCGCCGCCTCAATCTCCTTGCCAGACCGCCGGTC
GATCTTGGTCTGGATCTCAGCAAACTTGACAGCAATGTGGGACGTATGGCAGTCCAGCACCGGGGCATAGCCGTTGCTGATCTGGCCGGGGTGGTTCATG
ATGATGACCTGGGCGGTGAAGTTGGCAGCCTCCTTGGCAGGGTCGTCCTTGGAGTTGGAAGCGACGTACCCACGCTTGAGATCCTTGACAGCCACGTTCT
TGACGTTGAAGCCGACGTTGTCACCAGGAAGCGCCTCCAGGAGAGACTCATGGTGCATCTCAACGGACTTCACCTCAGTGGTCAGGCCAGTAGGACCAAA
GGTGACAACCATGCCTGGCTTGATGACTCCAGTCTCAACACGGCCCACTGGCACAGTTCCAATGCCGCCAATCTTGTACACGTCCTGA
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