Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5916  (registered. 2012)
Contig Information
Length 916 bp
Clones alternative view 94 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 12
Wh_dL Crown of seedling 3
Wh_e Seed DPA10 4
Wh_oh Pistil at heading date 2
Wh_r Root 5
Wh_yd Spikelet at late flowering 11
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 1
Wh_VHS Shoot with heat shock treatment 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_CA 3
WH_SP 8
WH_XA Root 6
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115466028|ref|NP_001056613.1|| Os06g0115500 [Oryza sativa (japonica cultivar-group)]
Score 391
Evalue 5.00E-107
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5916 
AATTCGGCACGAGGGCAAAACCCTAGCCCTCCCCCGCGCCGCCGCCGCACCGTCGTCTCCAGGTAAGGAGGAGGAGAGGAGGGCGAGATGGTGAAGCACA
ACAACGTCATCCCCAACGGCCACTTCAAGAAGCACTGGCAGAACTATGTCAAGACGTGGTTCAACCAGCCCGCCCGCAAGCAGAGGCGTCGCATCGCTCG
CCAGAAGAATGCTGTGAAGATCTTCCCCCGCCCTACCTCTGGACCTCTTCGCCCCATTGTGCAATGCCAGACCCGCAAGTACAACATGAAGGCCAGGGCT
GGCAGAGGATTTACCCTTGAGGAGCTTAAGTCCGCTGGCATCCCAAAGAAGCTCGCTCCGACCATTGGCATTTCTGTGGACCATCGCCGCAAGAACAGGT
CGCTTGAGGGTATGCAGTCCAATATCCAGCGGCTCAAGACCTACAAGGCCAAGCTTGTTATCTTCCCAAGGCGTGCTCGCAAGGTCAAGGCTGGTGACTC
TACTCCGGAGGAGCTTGCCAACGCCACACAGGTCCAGGGTGACTACATGCCCATTGCCCGTGGCGAGAAGCGCTCAGTCGAGGTCGTGAAGGTCACAGAG
GAGATGAAGGAGTTCAAGGCCTATGGCAAGCTCCGCGTCGAGAGGATGAACCAGCGCCAGTTGGGAGCCAGGCAGAAGAAGGCTGCCGAGGCGGAGAAGG
AGGAGAAGAAGTGATGAGATGCTTAAGGCAGCTAGTGGGTTCTGTTGTTATCAAGTGCTAGTTTCTGAATTTCTGTTTTGGCCTTCTCGGACATCTTGTT
TGATACCTGATATACTTATTTGCATGATCTGCTATCAAATCTTATCCTATGAGTGTCCTTGGATTTTTATCCTTGTATCTCTGATCAGTTTCTGTGTATG
ATTGCCTGTGTTTTGG
page-top