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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5903  (registered. 2012)
Contig Information
Length 1256 bp
Clones alternative view 27 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_RDr Root of dessiccated seed 1
Wh_VWD Shoot grown with dessication 1
WH_XN Leaves, plant was grown at constant 23℃ 8
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XC Root, treated at 50 microM Al for 6h 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115470169|ref|NP_001058683.1|| Os07g0102400 [Oryza sativa (japonica cultivar-group)]
Score 508
Evalue 8.00E-142
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5903 
TGGTAAAATTTACAAATATTAAGCTCCAAGCGGCATAACCANCAACGCTCCGATGGTAAACATGGCAAAGGCAATCACAAAACGACTCGGATAAACATCA
GGGAATCCACTACGATTTTCTCCTCTACTAGAGCAAAGCTATCGACCAAATTCCACCAAAAAAAGAACAAGCAGAAGACGGAAATTCACTGCTATAGGCC
CCCTGAACTGCACATTGCATAATCCATCGACAACACTTCGATGCTTTTGGAAAACACCAGCATTCAGCTCACACCAGACATGTAAAATTTTGGGCACTTC
CAAGTTTATCCATTATTCCAAGCATAACATCATACATAAGCACAAAAACTCTAGTTAATAGGGTGATATTGCGCCGATGCTCGCTTAGGTGGAAGCTTCC
GAAGGATGAAAAGGACCAGCGCGGAAGGCAGTATCTCTGTCAACATATAATAGAAGAAATCTAGGATTGGATGATCTAAAACCTCCAAAGAAACATCAGC
ATCAAATGCAGATACTGCCACCACGATGCATCTTATCAGGAAACAGGTGCAGCAGATTGTCGTCACAGTCCCAACCTCATAAAGCTTCTTTTTTCGCCCC
TTTGATTCAATGGGGAAACGTCTCAGCAAGACAAACAACCTTCCACCATATACTGCAAAACCAAGAAGGGCCACGGCGGAGACAGATACGATGAAGATTT
TGCTCACCAGCTCAACCAACGCATTGTCGTTTATTCCAAGGTACACCCAAATACAGATCTGAATTGCATATACGATGCTATTAACGGCTAGGTATATAAT
CCTTAACTTATCGGTGGGGAGACTCCTAGCCTGATGGTATATTTCTGCCCAGAAAAGAACAAGTAAGGTGTAGGCCGAGAAGAACAACAAGCCGGGGAGG
TCTAGTAACACCAACTTATAAACTTTAGTTTGGAGGAGGAAGACATAGGCATGGAATCCGAATACAACGGCACGAACCCCATTGACGACGAAGTTCATGA
GGTGGAACACCTTCTGCGTGGTCCAGCCGAACTCGGGCACTCTGCGCTGGATCCTCACCAGCTGAATCAGCGCGACGGCGGAGACGAGGGCGTAGGCGGC
GGTGAGGGAGAAGAAGGCGCCGTCCTGCCACGCCGGCGACTCGTTGACCTCCTCCCACCATCCCCGGAGCGCCGCGTGGCCGGCGGCGACGAGGGCCGCG
ATGGGGGAGGAGGTGGAGGAGGAGACCAGCTCCCTCATCTTTCCCCTCGTGCCGAA
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