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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5902  (registered. 2012)
Contig Information
Length 1256 bp
Clones alternative view 132 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 2
Wh_SH - 15
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 5
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 5
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XN Leaves, plant was grown at constant 23Ž 6
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 5
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 5
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XE Seedling, infected with leaf rust 8
WH_XF Seedling, infected with leaf rust 8
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 15
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XV Leaves, plant was grown at constant 23Ž 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 8
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 16
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|666054|emb|CAA59049.1|| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp."
Score 528
Evalue 7.00E-148
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5902
TTTTTTTTTTAAGGTTCAAAAGGGTATTCATTCTTTACATCGGTTACAACACCAGGGTACAAGTACACATCCAACAAGCATGCATTGCTCCACAATTACA
TACCATCATCCGGTTTACTTCCACGGAAAAAAAAGTCAAGTTCCACCAGCGATCTTCTTCCCCGTGGTAGCACACTCCTCGGATTAGTTGCTAACTCCCA
ACGTGTTCCTTACTTGGGGGCGAAGGCCCGGAAGATGGTGGCGTGGCCGGGGTCGGCGAGGTGAGCGAAGAGATTGTCGATGGGGCCGGTGCCGGTGTAC
TCGGCCTGGAACCACGCGCCCATGACGGCGAGCATGGCGAGGCGGCCATTCTTGATCTCCTTGGTGCGGAGCTCCTTGAGCTTCTCGGGCGAGCCGGTGC
CGTAGCCGAGCGGGTCAAACCACAGACCACCGGGGTACCCGACGTCGGTGCCGGTGAGCTTGTTGTTGGGGAAGATGGGGTCGGTGTTGACGCAGCCGGG
CTTGATGATGTCTGCCCACCGGCGGCCCTCGGCCCAGCCGATGAGGATGAGCTCCACGATGAAGAGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCG
GCGGTGTACCACGACGGCGTGTTGAGGATGCCGATCTTGGTCAGGAGCTCCGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCA
GCTCCGCCTGCACGTTCCACCGCAAGCTCTCCGGGTCGGATCCAAGACCCCAGGGGTCAAAGCCGAAGTCTCCGGGAAGGCTGCCGTCGAGCCACGGCGG
AGGGGTGCTCCCGGGGAACCAGATGGGCCTCTCGGGCGCCGCGGCGCGCACGGCGAACGACGCGCGCGACCCCGCCGCCTTGCCGGCAGCGCCAAGGAAG
GAGCTCCGGGCGCCGGCCAGCCCATTGCTGGGGAGCGCCGCGACGGCGGTGGCGGAGGAGGAGGAGACCAGCGCCATCGTTGTACCACCAGTGCGCTCGC
TGGCTGTGCCTGTAGTGGGGAAGGCGACGCCGCCTGACTGCCTGGCGCGGCTTTTAGCTTCGCCGTAGAAAGGTATTTCCAGCGTTGTTCGCGCGTTGGC
CAGACAAACACCGGACGATGTGCCGCGCCACCGGGCTGTTCACGGGGCAGGGCGCTGGTATGGGTTGCCAGATTCACTAGGGTAATGGGCGTCCCATTGT
AGGTCGGCACGCGTGCGCCTGGCGGAGCATATTTACTTAGCGGATCGTTTAACTTT
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