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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig573  (registered. 2012)
Contig Information
Length 2370 bp
Clones alternative view 37 Clones [Download: TSV  ,  FASTA ]
Wh_SH - 1
Wh_DPA20 Seed DPA20 1
Wh_KMP Shoot grown under continuous light 1
Wh_RDr Root of dessiccated seed 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 2
Wh_VWD Shoot grown with dessication 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218200182|gb|EEC82609.1|| hypothetical protein OsI_27183 [Oryza sativa Indica Group]
Score 1265
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig573
GTTGAGCGTTTTTGCACAGGTGGAATGTCCTTGGGTGCTATTTCTAGAGAAACACACGAAGCTATTGCCATTGCAATGAATAGGATAGGTGGGAAATCTA
ATTCAGGAGAAGGTGGTGAGGACCCAATCCGCTGGAGTCCCCTTACAGATGTTGTTGATGGGTATTCTGCGACACTCCCTCATCTAAAAGGTCTTCAGAA
CGGGGACACCGCCACAAGTGCCATTAAGCAGGTTGCATCTGGACGTTTTGGTGTTACACCAACATTTTTAGTTAATGCTGAACAAATTGAGATAAAGATT
GCACAAGGGGCTAAGCCTGGTGAAGGGGGTCAACTTCCTGGGAAAAAAGTCAGTGCATACATAGCTCGGTTGAGAAACTCCAAACCTGGTGTTCCTCTCA
TATCCCCACCACCACACCATGACATCTATTCTATTGAGGATCTGGCGCAGCTAATTTTTGATCTACATCAGATCAATCCTAAAGCGAAGGTGTCGGTAAA
GCTTGTAGCTGAAGCAGGAATTGGAACTGTAGCCTCTGGAGTATCTAAGGCAAATGCAGACGTAATTCAGATATCAGGGCATGATGGTGGAACTGGAGCT
AGCCCAATTAGCTCAATCAAGCATGCTGGGGGTCCTTGGGAACTTGGTCTTACGGAAACACACCAGACACTCATACAAAATGGATTGAGAGAGAGGGTGG
TACTTAGGGTGGATGGCGGATTCAGGAGTGGCCTAGATGTCCTTTTGGCTGCTGCCATGGGTGCTGATGAATATGGCTTTGGTTCTGTAGCTATGATAGC
TACTGGATGTGTCATGGCACGCATTTGCCACACAAACAATTGCCCAGTTGGAGTTGCTAGTCAGAGAGAAGAGCTACGCGCTAGGTTCCCTGGTGTTCCT
GGTGATCTTGTGAATTACTTCCTCTTTGTTGCAGAGGAGGTACGAGCCACATTAGCCCAGTTGGGTTATGAGAAGCTGGATGATATAATTGGGCGGACAG
ATTTACTTAAGCCAAAGCATATCTCTTTGGTGAAAACGCAGCACATTGATCTTGCATACCTATTAATGAATGCTGGATTACCCAAATGGAGCAGCTCTCA
GATAAGGAGCCAGGACGTCCACTCTAATGGCCCTGTTCTTGATGAGACAATCCTTGCAGATCCCGAGGTATCCGATGCAATTGAGAATGAGAAAGAGGTT
TCAAAGACATATCCAATTTATAATGTTGATAGGGCTGTTTGCGGCCGTGTAGCGGGTGCCATTGCTAAGAAGTACGGAGATACAGGCTTTGCAGGCCAGC
TGAACATTACGTTCACCGGAAGTGCAGGGCAGTCCTTTGGTTGTTTTCTGACACCTGGCATGAATGTTCGCCTAGTAGGAGAGGCCAACGATTATGTGGG
AAAGGGTATGGCTGGTGGAGAGCTGGTTGTAGTTCCTGTAGATGATACAGGATTTGTTCCTGAGGATGCTGCTATAGTTGGGAACACTTGTCTGTATGGA
GCTACGGGTGGTCAAGTATTTGTGAGAGGCAAGACAGGAGAAAGATTTGCAGTTCGGAATTCTCTTGGGCAAGCAGTGGTTGAGGGCACAGGAGATCATT
GCTGCGAGTACATGACCGGTGGATGTGTAGTTGTACTCGGCAAAGTTGGAAGAAACGTTGCAGCCGGAATGACCGGTGGCCTAGCCTACATGTTAGATGA
AGATGATACTCTAGTCCCGAAGGTAAACAAGGAGATTGTCAAGATGCAGAGAGTGAATGCTCCAGCTGGGCAGATGCAGCTCAAGGGCTTGATTGAGGCC
TATGTTGAAAAAACGGGCAGCACAAAAGGCGCTAAAATTCTGAGCGAATGGGAGGCATATCTGCCACTCTTCTGGCAGTTGGTGCCACCCAGCGAAGAAG
ACTCGCCTGAAGCTTGTGCCGAGTTTGAGAGAGTACTTGCCAGGCAAAAAACGGCAGTACAATCTGCTAAGTGATACTAGCCAAAGCCCAATCGCCAAAA
TGACCAAAGCTAAACGGAGGGAAAGCGTTCTTACTGCGATACTTGAAAGTGATTTTCTCAGACCGCGGTCCTTCTGAAGCACTAACGTCACCAAAGGCTG
CAATTTTGTGGAAGCTCTGTCCAAGGCATCTTCTGGAAACGAGCTTGCAGATACCGTCGAGGATTCTTCTGCACGCTCTTGCAGCCTAGGTAACCAACCA
CCCCTGTAAATTGGTTCGCTGACGCTAGGCTGCAAGGCCCGGCCCCTGTTGAACTGCTGCTTTCTTGTACATGATTCCTGGCTTCGCCTGTGTAATTATA
TTTTTTGTTCTGCACACATTAGTTCTTATATTTATACCCGTCCTGTGTTAGGAATGCGAGTTGCATGTGC
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