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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5729  (registered. 2012)
Contig Information
Length 924 bp
Clones alternative view 112 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 5
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_PCDAM Anther at meiosis 6
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 6
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_SP 2
WH_XA Root 1
WH_XB Root 4
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 13
WH_XE Seedling, infected with leaf rust 8
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|125538883|gb|EAY85278.1|| hypothetical protein OsI_06649 [Oryza sativa Indica Group]
Score 306
Evalue 2.00E-81
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5729
TTTTTTTTTTAGCAAAAAACCAACAAAGTGATGTCAGGCAATTTTACGTATGTTTTAGATTTTTACATCTAACAATAAGTCATTTTAAGCTTCATCAGCA
ACAAATGCAAGAGTAGCATTCACAACATCCAGTAAATAAGGGGGAAAAGACGAGGACACCAATCAGGTCAAGCAACGGAACAACTTTAGTTTCAGTTCCC
ATCTCTATTAATTTGTTGGATGGGTGCACCCATAGACCCATAGAGGCCTTCTGCCATCACTTCACAATATGACACTTGAATTCAGTCAGGTAGGTGGACA
GTACAATCCCATATAGCAGCAGCAGAACAGGAACAAAGATACATTAGGTGTAACAAGCGAAGATGGCTCCAACATCATCCTCCACCTAGGCTCACAAGGT
CAGCCCATTGCATACTTCTGGGTCCAGCTCCTCGCTGTGGACTCATACTTCGCACGATCACTCTTGTACATGTGTGCAATCTCCGGAACCAACGGGTCGT
CGGGGTTCGGGTCTGTTAGTAGAGAGCAGATTGAAAGGAGCACCTTTGAAACTGTCAATGCAGGGCTCCATTGTTCCTTCAAGATATCAAGGCAGATGCT
CCCATTGCTGTTGATATTTGGGTGGAAAACCTTTGTTTTAAATGCAACCTTCGGTGGTTTGAATGGGTAGTCTGGGGGGAAGTGAATAGTAACCAAAAAT
ACACCACCAGCATATGGGCTTTCCGATGGGCCCATGATCGTTGCTTGCCAGTGGAACATATCTTCTGCCACAGGGCCGGCGCTGCAGGAGGTGGGGGGAT
CCCTCTGCAGGTCCTTGAGCTCCTTGAGGATCCGCTTGGACGCCATGGGGACGGAGACGGGGCCGGGGCCGGCCGGCTAATCAGGCAGCGGAGCTGGCTC
CGATTCCAATCGAAATCGAGAGGA
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