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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5704  (registered. 2012)
Contig Information
Length 940 bp
Clones alternative view 154 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 6
Wh_h Spike at heading date 2
Wh_r Root 3
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 5
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 3
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VABA Shoot with ABA treatment 3
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 6
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 8
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XA Root 1
WH_XB Root 13
WH_XC Root, treated at 50 microM Al for 6h 13
WH_XD Root, treated at 50 microM Al for 6h 20
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|222636687|gb|EEE66819.1|| hypothetical protein OsJ_23579 [Oryza sativa Japonica Group]
Score 365
Evalue 5.00E-99
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5704
TTTTTTTTTTAGGTAGATAGATGCTTGAACACTTATTACGAAATTGAACAGGACTCTCTTTAGCTGTTTACTTCACAAACATCTTAGGGCTCGAATACAA
TAAAACAATAGTATGACAGTGAAACCACAGCCGGAGCTGGCTCAGTAACTGTTGATCTCAGGAAAATACACAGTACATACGGGAATAGCATAGCACCATC
CCATCCCAACACAATCCCTAGGTACCCGGTGATTCAATCGTCCATCCAAAGCGCTCCTAGCTCCTTCAAAATCTTGACGAAAATTTAGGGCTTGCTGGCA
ATGTTGCTGGACAGCCAGTCCAGGCCTTCATACAGTCCCTCCCCTGTTGTAGCACAAGTGCTCTGGATGTACCAGTGTCGCTGGCGAAGGGAGTGCAGGC
CAAGCTTATCAGTGATCTCAGCAGCATTCATGGCATTTGGAAGATCTTGCTTGTTAGCAAACACAAGCAGCACAGCATCACGTAACTCATCCTCATTCAG
CATCCTGTGGAGCTCATCCCTTGCTTCAACAACACGGTCCCTATCGTTGCTGTCCACAACAAAGATGAGACCCTGTGTGTTCTGGAAGTAATGCCTCCAC
AGTGGCCTGATCTTGTCCTGACCCCCGACATCCCAGACAGTGAAGCTGATGTTCTTGTACTCCACAGTTTCAACATTGAACCCGATGGTGGGGATGGTGG
TGACGATCTCGCCGAGCTTGAGCTTGTAGAGGATGGTGGTCTTTCCGGCGGCGTCGAGACCCACCATCAGGATCCGCATCTCCTTCTTGGCGAACAGGCG
GCTGAACAGCTTGGTGAACGTGAGCCCCATCTCCTCTCCTCCCGCGTAGGTGCTCTTCCTCCCGGCTCGCCTCTCCTGATCGGGGGAATCGCTCGATCCG
CGGTGGGTTCGCCGGCGCCGGAGCCGGAGAAGGTGGGCGG
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