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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5381  (registered. 2012)
Contig Information
Length 808 bp
Clones alternative view 23 Clones [Download: TSV  ,  FASTA ]
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 2
Wh_VABA Shoot with ABA treatment 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XB Root 1
WH_XE Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115463429|ref|NP_001055314.1|| Os05g0362300 [Oryza sativa (japonica cultivar-group)]
Score 241
Evalue 5.00E-62
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5381 
ACCTCAAGCAAGCTACCCCCGAAGCCACCGCTGAAGAAACAAGAAAAAGGAGAATGAAATCCGCGATGCTTCCCCTCCTCCTCCTGCTCGCCGTCGCCGG
CCCCGCCGCCGCGAAGCCGACGGCCTACGAGGCGCTGGCGGCCTTCGACTTCCCCCCGGGCATCATCCCCAAGGGGGTCGTCTCCTACACCCTCGACAAC
GCCACCGGCGACTTCACGGCGCACATCAACTCCTCCTCCACCTGCGAGTTCTCCATCCAGGGCTCCTACTCGCTCCGCTACAAGCCCGACATCAGCGGCC
GCATCTCCGTCGACCGCCTCACCAACCTCCAGGGCGTCACCGTCAAGGTCCTCTTCTTCTGGCTCAACATCGTCGAGGTCACCCGCAGCGGCGACCAGCT
CGGCTTCTCCGTCGGCATCGCCTCCGCCGACTTCGGCCTCGACAACTTCCTCGAGAGCCCCACCTGCGGCTGCGGCTTCGACTGCAACGACCTGCTGCTG
CCGCGGTCCACCGCCGGGTCAAGCCTGCGCCTGCGAGGTGCGTTCTAGGATCCCCCACCGAGCTCTCTCACAAGTCACAAGCGCCCCTTCAAAATTAAGC
TAGTTCTTGGATGGATTATTCATGCTCTTGTTGCTCGAAGATACCAAGGGGCTGGTAGTATTTTCTAGTGCTGTTCCTGTTTTAGATGGACCAACAATTT
CAGGACTCGATTTCGATGGGTCCGTGTGTGAGTGCTGTACTGTTTCATCAGAAAGTTTAGAGTAAAACACTTGAGATTAATAAAAGTTTCATATTCCTAA
AAAAAAAA
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