Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5374  (registered. 2012)
Contig Information
Length 780 bp
Clones alternative view 111 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 7
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 2
Wh_r Root 1
Wh_yd Spikelet at late flowering 4
Wh_CSEC Callus 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 4
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_PCDAM Anther at meiosis 3
Wh_SHC Shoot grown with cold treatment 2
Wh_VSCB Liquid cultured tissue 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 8
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 8
WH_XA Root 6
WH_XB Root 4
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218555253|ref|YP_002388166.1|| nitric oxide reductase [Escherichia coli IAI1]
Score 168
Evalue 5.00E-40
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5374
TTTTTTTTTTATGAAAACGAGGAATATAAAATTAGAGCATCAAAACAAAGCATGGCCGGCCTTCACAAAATAATAAAAATATAAGGATGCAGAGCAACCT
TCTAACCATAATGGCACGACAGGAACAGAATTATCGGTTTCACATGCTCAAACAGCAGTCACTAACATGGTTTCATGGTTTTGTCACCAGGATTCAAACA
TTAATAGTAGTTCATTACATAGCTTATAGGATAAAGATCAGACTTGATGAAGCACCACAGTTCGTTGATAATTTCCTAGCCCTTGCTTCCTTTGAGGTTT
CCATTCTTAACGGTACTTGATGAAGCCGATGTCCTTGGCGTTGCTGCGGAAGCACTGCCTGCAGCACATCAGCCCGTACTTGCGGATCAGGCCATGCGAG
TTGCCGCAGACACGGCAAACCCTGGATCCGGGGCCGTAGTTCTTGGGGTGCGAGTTCCAGACGTTCGAGTGTCCCATGGCGGCGGCGGCGGGGCGGCTTG
CAACTGGAAACCCTACCTTTTGCTCTCGCCTGGACGCCACTATTCCATTAACCCTGATTGCCGCCGACAGCATGGATGAGTACAACAAACCTGACCTCAG
CCATGTTATCAGTCAGGGGCAACGTGCCGATGACCTTACCCGCCAGACGGCGGGTGAATTTGCCGAGCAGTTTAATCTGCACCTGTTTCCACAAACCTGG
GTGACGGATATCGATGCCGAAGCCCGTGTGGTGAAAAGCCAGAATAATCAGTGGCAATACGACAAGCTAGTACTGGCAAC
page-top