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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16204  (registered. 2002)
Contig Information
Length 1644 bp
Clones 74 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 13
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 8
Wh_e Seed DPA10 12
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 6
Wh_r Root 2
Wh_yd Spikelet at late flowering 9
Wh_yf Spikelet at early flowering 8
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha >gi|170776|gb|AAA34306.1| translation elongation factor 1 alpha-subunit >gi|949878|emb|CAA90651.1| elongation factor 1-alpha [Hordeum vulgare subsp. vulgare]
Score 2273
Evalue 0
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig16204 
aagcaggttctagtactagcattcaccacaggaaaacaaaaccacaAATGGGATAAGAGCACAATAATGGAATCGAAATAGAGTATTTAAACG*ACACAT
*CATAG*CTCGCACACAGGTGCAGG*AGTCAAAGTGCAATAACGCCCAGG*AACACTTAACATACACTAAG*ATTCTCCAAAAAAG*ACTTGACACTAAA
ACTTCTGCTAGATAACTC*GATGGCAGACACCAG*AGCACTCATTTCTTCTTGATGGCGGCCTTGGTAACCTTGGCACCGGTGGGGTCCTTCTTCTCCAC
GCCCTTGATGACACCAACAGCAACCGTT*T*GTCTCATGTCACGCACAGCGAAGCGGCCAAGAGGAGGGTAGGTGGCGAAGGTCTCCACAACCATGGGCT
TGGTGGGAATCATCTTCACGATACCAGCGTCACCGTTCTTCAGGAACTTGGGCAGCGCCTCCAGCTCCTTACCAGATCGCCTGTCGATCTTGGTCACCAG
CTCGGCGAACTTGACAGCAA*TGTGGGAGGTGTGG*CAGTCCAACACTGGGGCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGATGATGACCTGGG
AGG*TGAAGTTGGCCGCTTCCTTGGCAGGGTCATCCTT*GGAGTTGGATGCAACAAAGCCACGCTTCAGATCCTTCACAG*CAACGTTCTT*GACGTTGA
AGCC*GACGTTGTCACCAGGAAGCGCCTCCAGGAGAGACT*CGTGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGACCAGTGGGACCAAAGGTAACA
ACCATACCAGGCTTGATGACACCAGTCTCAACACGGCCAACAGGCACAGTTCCAATGCCACCAATCTTGTAAACGTCCTGAAGGGGAAGACGGAGGGGCT
TGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTC
ACCCTCAAACCCAGAGATGGGGACAAAGGGAACCTTGTCAGGGTTGTATCCGACCTTCTTCAGGTAGGAAGAGACTTCCTTGACAATTTCCTCATAACGG
GCCTTCGAGTACTTGGGGGTGGTGGCATCCATCTTGTTGCAGCAGCA*GATCATCTGCTTCACTCCAAGAGTGAAAGCAAGGAGGGCGTGCTCACGGGTC
TGGCCATCCTTGGAGATACCAGCCTCAAAACCACCAGTGGTGGAGTCAATGATGAGCACAGCACAGTCAGCCTGGGAGGTACCAGTAATCATGTTCTTGA
TGAAGTCACGGTGACCAGGGGCATCAATGACGGTGCAGTAGTACTTGGTGGTCTCGAACTTCCACAGGGCAATATCAATGGTGATACCCCTCTCACGCTC
GGCCTTCAGCTTGTCAAGCACCCAGGCGTACTTGAAAGACCTCTTGTTCATCTCAGCGGCTTCCTTCTCGAACCTCTCGATCACACGCTTGTCAATACCT
CCAAGCTTGTAG*ATCAGATGGCCAGTGGTGGTCGACTTGCCAGAGTCGACATGGCCAATGACCACGATGTTGATGTGAGT*CTTCTCCTTACCCATGGC
Tccgaggaaggagaaggaaccgagaggaggcggcggcggggatg
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