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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5332  (registered. 2012)
Contig Information
Length 895 bp
Clones alternative view 186 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 15
Wh_dL Crown of seedling 14
Wh_e Seed DPA10 8
Wh_f Spike at flowering date 3
Wh_h Spike at heading date 6
Wh_r Root 1
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 9
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 5
Wh_PCDAM Anther at meiosis 4
Wh_SHC Shoot grown with cold treatment 9
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 8
WH_XA Root 15
WH_XB Root 15
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|212723604|ref|NP_001131862.1|| hypothetical protein LOC100193240 [Zea mays]
Score 352
Evalue 3.00E-95
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5332
TTTTTTTTTTAGATCAAACCAAGACATATTATGACAGAACACATCGACATTCAACATATCCAAATATGTCTGAACAGGAATAGGTTTCACAAAGACAAGC
ATCAGGCACGTTCTTGCCACTACATCGAAATGTTCATTCCATAAAACTTAACGCATAGCTAAAACAGTTCTAGATATCTTGTAAAACACATTCACTTCAA
AATCTCCAGCCAAAAGCGAGACCCTCAGATGCACATCCATCTTAACGGTTAGCCTTGGCAACACGCTCAATCTCGTCCTTCTTCTTGATGGCATAGCTGT
TGGATGAGCCCTTGGCAGCATTGATCAGCTCATCAGCAAGGCACTCAGCAATGGTCTTGACGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTCAGAAG
GTAGATAGCCTGGTTCACCCTCCTCAGGGGGGAGATATCCACAGCCTGCCTCCTCACAACACCAGCAGACCCAATACGGGTAGCATCCTCACGTGGACCA
CTGTTGATGATGGCATCAACGATGATCTGGATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGTGTGCTTGATGATGCGGACGGCCATGATCT
TCTTTCCGTTGTTGCGCCCGTGCATCATGAGGGAGTTGGTGAGGCGCTCGATGATGGGGCACTGCGCCTTGCGGAAGCGCTTGGCCGAGTAGCGACCGGC
GGAGTGCGGCAGGAAAGTGTAGTGCTTCATCGACGTCACCGCGAGGTAGTCGTTCAGCGAGATGTCGGTCACCTGAACATCCTCGAAGGTCCAGCGGTTG
AAGAGCTTCACGTCGCCCCCGGGCACCGGCTCCGCGACCGCCATGGCTGAGGGTGTGGTGGGGGGAGGGGAGGTGGCGGCGGCGGTTGCAGGGGA
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