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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig500  (registered. 2012)
Contig Information
Length 1790 bp
Clones alternative view 176 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 9
Wh_dL Crown of seedling 3
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 2
Wh_r Root 1
Wh_yd Spikelet at late flowering 2
Wh_SH - 1
Wh_CSEC Callus 11
Wh_DPA20 Seed DPA20 6
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 8
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 8
Wh_OKCS Seed DPA5 6
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 9
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VSCB Liquid cultured tissue 3
Wh_VWD Shoot grown with dessication 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 7
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 5
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 7
WH_XN Leaves, plant was grown at constant 23℃ 12
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 6
WH_XA Root 4
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XF Seedling, infected with leaf rust 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1170509|sp|P41378.1|IF4A_WHEAT|IF4A_WHEAT RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
Score 816
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig500 
GGAATTCGGCACGAGGTAAAAGGCGGCTCTCCCCGCCGCCGCCCAAACCCTCTGTTTTTCTCTCTCCTGCCAATCCCCTCATCGCCTCCGCTCCCACGCC
GCCGAATCCGAGACCTGATCTCGGATTCACCGCAGCGACGCGACCAAACCCTCAGGCGATCCCCGGCACCTCCTCCCCGACGCTTCAGCCATGGCAGGAA
TGGCACCGGAAGGTTCCCAGTTTGACGCTAAGAACTATGATTCTAAGATGCAGGAGCTGCTGAGCCAAGGTGAGACTGAGGAGTTCTTCACCTCCTATGA
TGAAGTTCATGAGAGCTTTGATGACATGGGTCTCCAAGAGAACCTCCTCAGAGGAATTTATGCTTATGGTTTTGAGAAGCCTTCTGCCATCCAGCAAAGG
GGAATCGTTCCTTTCTGCAAGGGGCTTGATGTTATCCAGCAAGCACAATCTGGAACAGGAAAGACTGCTACTTTCTGTTCTGGAATCCTTCAACAGCTTG
ACTATGGTTTGGTTGAGTGCCAGGCCTTGGTCCTTGCTCCCACACGTGAGCTTGCACAGCAAATTGAGAAGGTCATGCGTGCACTTGGTGACTACTTGGG
TGTGAAGGTTCATGCATGTGTTGGAGGAACCTCAGTTCGTGAGGACCAAAGGATTCTTGCAAGTGGAGTGCATGTCGTTGTTGGTACTCCTGGTCGTGTG
TTTGACATGCTCCGCAGGCAGTCTCTGCGCCCTGACAACATCAAGATGTTTGTCCTCGATGAAGCTGATGAGATGCTTTCCCGTGGTTTCAAGGATCAGA
TTTATGACATCTTCCAGCTTCTCCCAGGGAAGATTCAAGTTGGTGTCTTCTCTGCCACCATGCCCCCTGAAGCCCTTGAGATTACCCGCAAGTTCATGAA
CAAGCCAGTGAGGATCCTTGTCAAGAGGGATGAGCTCACCCTTGAGGGTATCAAGCAGTTCTATGTCAATGTGGAGAAGGAAGAGTGGAAGCTCGACACA
CTGTGTGACCTGTACGAGACTCTTGCCATCACCCAGAGTGTCATCTTTGTGAACACCCGCCGCAAGGTGGACTGGCTCACCGACAAGATGAGGGGCAGGG
ACCACACCGTCTCCGCCACTCACGGAGACATGGACCAGAACACTAGGGACATCATCATGAGGGAGTTCAGATCAGGTTCTTCACGTGTGCTCATCACCAC
TGACCTGCTTGCTCGTGGTATTGATGTCCAGCAAGTGTCCCTTGTCATCAACTATGACCTCCCAACCCAGCCAGAGAACTACCTGCATCGCATCGGGCGT
AGTGGTCGGTTCGGGAGGAAGGGTGTGGCCATCAACTTTGTGACCCGTGAAGATGAGAGGATGCTGTTTGACATCCAGAAGTTCTACAACGTGGTGATTG
AAGAGCTCCCAGCCAACGTTGCCGACCTTCTGTGATCGGGCGGGCTGTCGAGAACATATGGTAAGGGGGTCCTGACAGGGCTTTGTTTTTGTTGAAGTAT
CACCAAACTTTCTTGTCTGTGGGTGGGGGGGTTCAAGTGATAAATGGTCTGGGGTTCTACTTTAAAGTCGTGGTCGTGGACAATTTGGGATTTATTAAGC
CATGTTTTGGGAATTTTTGTAGTTGCTAGGCTGTGGTTCTATGTGCTGAGGAGGGAGGCGCTGCTGCTCATGTTGCTGTTGCTGGAGTCCTCACTTTATT
TGTTAAGACTATGTAATGACCGAATGATGTTATTTGTTTGTGTCATCCTTGACTCTTTACCTACCGCATGTAATCCTGCAATCGGTACTA
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