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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig12041  (registered. 2002)
Contig Information
Length 850 bp
Clones 5 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 4
Wh_r Root 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os05g0574400 [Oryza sativa (japonica cultivar-group)] >gi|50080249|gb|AAT69584.1| putative malate dehydrogenase [Oryza sativa (japonica cultivar-group)] >gi|52353548|gb|AAU44114.1| putative malate dehydrogenase [Oryza sativa (japonica cultivar-group)] >gi|113579940|dbj|BAF18303.1| Os05g0574400 [Oryza sativa (japonica cultivar-group)] >gi|125553415|gb|EAY99124.1| hypothetical protein OsI_21084 [Oryza sativa Indica Group] >gi|125595304|gb|EAZ35363.1| hypothetical protein OsJ_018846 [Oryza sativa (japonica cultivar-group)]
Score 610
Evalue 2.05252e-61
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig12041 
gatgagaagaagctgtttggtgtgaccactcttgatgttgttcgtgctaaaacattctatgctggaaaggcaaacgtGCCAGTTACTGGGGTGAATGTTC
CTGTTGTTGGTGGCCATGCTGGAATCACTATCCTGCCACTGTTCTCACAGGCTACTCCTGCAAGTAATGCATTGTCCCATGAGGACCTTCTCGCCCTCAC
GAAGAGGACACAAGATGGTGGGACGGAA*GTTGTTGAAGCGAAGGCTGGAAAGGGCTCAGCAACATTGTCGATGGCATATGCTGGTGCTGTTTTTGGAGA
TGCATGCTTGAAGGGGCTCAACGGTGTTCCTGACATCGTAGAGTGCTCTTTTGTCCAATCAACCGTAACAGAGCTGCCATTCTTTGCCTCCAAGGTGAGG
CTGGGGAAGAGCGGAGTGGAGGAAGTGATGGGGCTGGGCGAGCTGTCGGCCTTGGAGAAGGAGGGGCTGGAGAGCCTCAAGGGCGAGCTGCTGTCTTCCA
TCGAGAAGGGTGTCAAGTTCGCGCAGGAGAGCTAGGCGGCGACCTTCTCAGCCTATATCGAACGGTTCACACTTGAACTCATGCAATTTTTGTTCGGCCG
CTTTTTTGTTGCCTCCAAACCCGGTTGTGCTGCGGGGCATCGTGGCGTCGTCGTGCTCCACAATAAAATGTACTGGCTTTGATGTCGCCAGACTGAACTG
AACCTGTAGTATCAGAAAATGCAGACACCGGTGCCTATGTGTTTACAGCATTTGTACCCGAGATCACGAAGCGAAACTGAAGATTCTGTTGGCATTATAT
TGTGCCGATCGGCCCCTTGTGTTCTACATACAGGGGGGGTTTGCCattcc
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