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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7275  (registered. 2002)
Contig Information
Length 607 bp
Clones 3 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 1
Wh_f Spike at flowering date 1
Wh_yf Spikelet at early flowering 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0351800 [Oryza sativa (japonica cultivar-group)] >gi|108708145|gb|ABF95940.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] >gi|113548591|dbj|BAF12034.1| Os03g0351800 [Oryza sativa (japonica cultivar-group)] >gi|125586254|gb|EAZ26918.1| hypothetical protein OsJ_010401 [Oryza sativa (japonica cultivar-group)] >gi|215697791|dbj|BAG91984.1| unnamed protein product [Oryza sativa Japonica Group]
Score 415
Evalue 4.18042e-39
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig7275
ttaTACTGACTTGTGTAAAAGCAAAcaa*aatCAGCTGCtacgaAATTTAGCAag*atAGATGACTATATActcgcAAGGAAATCCATTTTGTGGGGCGA
CTATAACAAGCCATACATTACATATTGGGTGTAAGAcgtgaCACACAtaaagcacaTTTGATCAGCATCTTCACtaaaaataGCATtgtgaACTCCAACC
AGgtaaccaaacTAATCTAACGAGAACCAGTGCTagaacttgatgagcggaaaggccataggaacgagaacggattccttctcctctgacgcccactggt
tcttccactgctacttgagctgcttgaactgtcattttgGTTGGTTGATCTTGAGCGTGAGCAGctagcACCACTAGAGCTCTGTGTTGGCAGCTCATAT
CGGcacacagggcaGGAATTGTGTTGTTCTAGCCAAGGAAGTATGCAATCAGAGTGGTATAAATGCTTGCATGGCATCTCTCTTGCTtctgatcccaGTT
CAAACTTGTCCTTGCAGACAGGGCAATGCGAGTCTCCAGTGAGATGCctggcAGTGATCCTAACACTAGGCATGGCAtcaatagaTGACTGAgaggcagg
tggtggc
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