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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig393  (registered. 2012)
Contig Information
Length 920 bp
Clones alternative view 145 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 7
Wh_f Spike at flowering date 4
Wh_oh Pistil at heading date 1
Wh_r Root 3
Wh_yd Spikelet at late flowering 1
Wh_SH - 1
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 7
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 3
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_SP 4
WH_XA Root 13
WH_XB Root 10
WH_XC Root, treated at 50 microM Al for 6h 14
WH_XD Root, treated at 50 microM Al for 6h 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|49343245|gb|AAT64932.1|| cytosolic malate dehydrogenase [Triticum aestivum]
Score 419
Evalue 3.00E-115
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig393
TGGGGAGTTTTTATGTGACTTGTTGTTTTTGCTCTAAGAGAAAAACAAGTTGATTCTAATCAGGTGTCAAATTGTTTCATCCTTCCAGCAAATGTACTGT
CCTGTAAATCATCAGGCAAAAGGGGAGCTACAAGCCTCATTCATACACACTGGGAAAACCAGCGAAAAGGAGCATGCATCGCGATGTGCGGCTGTTCTGG
GTGGAGACGAGAGTTTCTAAGGAGCGGAAGGTTTCATTTATTCAAAACATCAGAGGAGCAGCTGCCCTTCGAATGTGGATTTACGCGAGGCATGAGTAGG
CCAGCGCCTTCTCCTCCGACAGCTCCTGGGCGGTGGCATCCATCTTCTTCCTCGAGAACTCATCGATCGGGAGCCCTTGAACAATTGTCCATTCACCACC
ACTGCACGTTACTGGGAAGGAGTAGATAAGACCAGCAGGCACACCGTATGAACCATCAGAGTACACACCCATGGAAACAAATGTTCCCTCGGCGGTTCCC
AGAACCCAGTCACGGATGTGATCACAAGCTGAGCTGGCAGCAGAGAGAGCACTGGAGAGCTTCCTCGCTTTGATGATTGCAGCACCACGCTGCTGGACAG
TGGCAATGAACTCCCCGTTTAGCCATTCATCATCTTGAACAAGTTCACGAACAGGCTTCTCTCCACTGGAAGTCTTCACAGTGGCGTGGTTAACATCAGG
GTACTGACTGGACGAGTGATTACCCCAGATAATAGCATTCTTCACGTCAGAAACTTGGACACCAAGTCTCTCAGAAATCTGACCGAGTGCCCTGTTGTGG
TCTAGGCGGGTCAAACAACTGATGTTCTTCTCAGGGATAGATGGAGCAAACTCCTTCANNNTGAGAGCATTGGTGTTTGCTGGGTTGGCAACAACCAAAA
CCTTGCAGTTGGGGGCTGCA
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