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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig3860  (registered. 2012)
Contig Information
Length 1051 bp
Clones alternative view 135 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 7
Wh_f Spike at flowering date 9
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_r Root 1
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 12
Wh_DPA20 Seed DPA20 1
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 3
Wh_OKCS Seed DPA5 4
Wh_SHDr Shoot grown with dessication 1
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 7
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 5
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 3
WH_XA Root 1
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115589738|gb|ABJ15728.1|| S-adenosylmethionine decarboxylase [Triticum monococcum]
Score 252
Evalue 6.00E-65
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig3860
AGATGTACAGTTAACAGAAAGAAAGAACGTATCATCAGAATATCTGCAACGCTGCAACATGCTTGATGCTAGCTAATGTTGCTGGAGAGTCGAGAGATAG
TTTTTTTTAGCAGCCATATTCTCGACAAATAATGTTGCACAAGAATTCCTCCCACCCCCACCGTCTCGCCGCCGCCACCACCGCCGCAGCTAGATAAGAA
GAAAAAAAGAGAGAGAAGAACTCGTCGGGAGGGCTCGAGATCTGTGTCGGGAGAGAGGGAATTCTTGAGATCGGAATCGGAACAAGCGGGCGCGCTCGGG
ATCGGGGTTACCATACAATTTTTCCCAGGAACCTTTAGTGAATGTGCTAATGGAGTCAAAGGGTGGCAAAAAGTCTAGCAGTAGTAGTTCCCTGATGTAC
GAAGCACCCCTCGGCTACAGCATTGAAGACGTTCGACCTGCTGGAGGCGCCAAGAAGTTCTCTGCTGCATACTCGAACTGCGCGAAGAAGCCATCCTGAT
ATCGTTTTTGGCATCCCCTTCTCGTAGTTTAGGATTTTTATGCAATTTTATTCTGACTCTTTTCTCCCACCAATCTCTCTGGCTTGCTGCTTCACGATAA
TCGACCAGTTCTCTAGTCTTTCTCCCTCTGTTCCTCTCTGCTCTGCTCTCTGACTCGAACTGCAACAATGGCTGCCCCGACCTCTGCGATCGGGTTTGAG
GGCTACGAGAAGCGCCTCGAGATCACCTTCTCCGAGGCATCAATCTTTGCCGACCCTCATGGTCGTGGCCTGCGCGCCCTCTCCAGGGCCCAGATTGACT
CTGTTCTTGATCTTGCACGGTGCACCATTGTGTCCGAGCTCTCCAACAAGGACTTCGACTCCTATGTGCTATCTGAGTCGAGCCTGTTCATCTACTCTCA
GAAGATTGTGATCAAGACCTGTGGGACTACCATGCTCCTGCTCACCATTCCTAGGATTCTTGAGCTTGCTGAAGAGCTGTGCATGCCGCTTGCTGCCGTG
AAGTACTCTCGTGGGATGTTCATCTTCCCCGGCGCACAGCCTGCTCCCCAC
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