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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig3794  (registered. 2012)
Contig Information
Length 1701 bp
Clones alternative view 503 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 3
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_OKCS Seed DPA5 5
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 10
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 5
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23 14
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 52
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 81
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 13
WH_XR Roots, 18 day old plants were grown hydroponically 26
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 37
WH_XT Roots, 18 day old plants were grown hydroponically 17
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 66
WH_SP 3
WH_XA Root 2
WH_XB Root 2
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XE Seedling, infected with leaf rust 34
WH_XF Seedling, infected with leaf rust 26
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 11
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 51
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 12
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 3
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|170795|gb|AAA50850.1|| wali5 [Triticum aestivum]
Score 196
Evalue 8.00E-48
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig3794
TTTTTTTTTTATCAGTCTCACAGCATGACATTGCTTCATCGGTGCGCAACAATAGCATCAGGGTAGGCGGATCAATCCCACATATATATATGTCCACAGG
ATCAACTAGAAATATATAGATAGATAAGATAGATACATGGTTGGTACTAGATGGGATAGGATTGGCGAAGCTCCTCGTCAGCTTCTCAGACCACAAGAGC
AAGAGCACCGTCATGGATGGGATTAGGCCCCCACCAAGAAAGGCCAGCGAGCGTTGTTGGCCTGAACGCGGCGCTCATACCGCGACATGACCCTGCCGTC
GCTGCCGATGGCGTCGTCCTGCGAGTGGTAGCCGTCCGACACATCCCCATCCGAGTAATCCACTTGGTCCGTCGGTGGCTTGGTGGACTCGATCCACGCC
AGGAACGCTGCCCCCTCCTCATCCCGCTCCAACTCCACCTTCCTCTTGGAGCCACACTTCTCCGCCTCCTTCTCCGCCTCCGCCTTGGCGTCGAGGAAGT
CCTCCTCCTTCTCCAGCAGCGCCACGAACTTGATGAGCGCCTCCTCCTCCTCCTTGGTGAGGGTCCTCAACTCCACCTTGGCCTTGACCTCCTTTGACTT
GGCCTCGACCTCCGGCTTGGCCTCCTTCGCCTTGGCCTCCTTCGCCTTGGCCTTAACCTCCGGCTTGGCCTCCTTTGCCTTGGCCTCGACCTCCGGCTTG
GCCTCCTTCGCCTTGGCCTTCTTCACCTTGGCCTTGACCTCCGGCTTGGCCTTCTCCTCCTTGGCCTTGGCCTCCTTGACCTCCGGCTTGGCCTTGGCCT
TCTTCGCCTCCGCCCTCNNNNNNNNCGGTGAAGGCCTCCAGCTCCGCCTGGAACGTGGTGAAGGGGAAACCCTCCAAGCCGGCGGGCAACGGCATGGACA
AGTGCATCTTCTCGACGGCCATCGCCGGATCCGCTNNNNNNCTCTCCTCTCCTGGTCGTTTCAATCAGGGTTAGGGTTTGGGTTAGGGTTTGGTGGGGAT
TGGGGATTTCTCGCTCGCTCGATCTTCTTCCGCAACAACACAGAGCATTCTACCACCGCACCGCACGAGTGAAGTGAGAGCTTTGCACGAAAACTTCATC
AGAAACCATGAAGGGCACCAAGCTCGCGGCGATCCTGATCCTCCAGGCCGTCCTGGTCATGGGACTCCTCTCACACGTGAACGCCGATTTTTTCCCCAAG
TGCTGCAACAACTGCAGGTCCTTCTCGGGGGTCGACGTCTGCGACGACGCCCACCCCAAGTGTCCCCAGGGCTGCTCGGCGTGCCGCGTGGTGTCGACGA
GCCCCGAAATGTGGCGCTGCGCGGATATGAAATCCACCGTCGACGGCACCTGCGGTGGACCCTGCAAGAAGTACTGATCGGTTCATGCCGGCATGATATG
TTCCGCCTAAAATAAAATAAAAGCTCAGGCGAGATGAGCAGCGTCATCGTGCCTATGCGTGTGTGTGTGGCCAACAATGCTTATACCAGTATGTCGTCTC
TTCGTCGCTGTGTTTTCTCTCTCGAGAAAAAGTTGGTGTTGCTTGTTGTTCAGCTATCCGGAATATCCTCCGTGAATAAACAGCTGTAATGATTGTGCGT
GGCTGCCAATAATATGAGTTCTCTTGTCCACGCAAAAAAAAAATCCCGTTGTATTTATACTCTCCGATATGATATCCATTGTTGACAAAAAAAAAAAAAA
A
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