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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig36807  (registered. 2012)
Contig Information
Length 1012 bp
Clones alternative view 146 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 3
Wh_e Seed DPA10 4
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 9
Wh_oh Pistil at heading date 1
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 8
Wh_DPA20 Seed DPA20 2
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 6
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 4
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VSCB Liquid cultured tissue 3
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlings(22℃ 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 8
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 6
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 5
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 2
WH_XA Root 12
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242037651|ref|XP_002466220.1|| hypothetical protein SORBIDRAFT_01g003770 [Sorghum bicolor]
Score 364
Evalue 1.00E-98
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig36807
AATTCGGCACGAGGCTCGTGACCTCCTGTTTCCGCCCACCTTCTCCGGCTCCGGCGCCGGCGAACCCACCGCGGATCGAGCGATTCCTCCGATCAGGAGA
GGCCAGCCGGGAGGAAGAGCACCTACGCGGGAGGAGAGGAGATGGGGCTCACGTTCACCAAGCTGTTCAGCCGCCTGTTCGCGAAGAAGGAGATGCGGAT
CCTGATGGTGGGTCTCGACGCCGCGGGAAAGACCACCATCCTCTACAAGCTCAAGCTCGGCGAGATCGTCACCACCATCCCCACCATCGGGTTCAATGTT
GAAACTGTGGAGTACAAGAACATCAGCTTCACTGTCTGGGATGTCGGGGGTCAGGACAAGATCAGGCCACTGTGGAGGCATTACTTCCAGAACACACAGG
GTCTCATCTTTGTTGTGGACAGCAACGATAGGGACCGTGTTGTTGAAGCAAGGGATGAGCTCCACAGGATGCTGAATGAGGATGAGTTACGTGATGCTGT
GCTGCTTGTGTTTGCTAACAAGCAAGATCTTCCAAATGCCATGAATGCTGCTGAGATCACTGATAAGCTTGGCCTGCACTCCCTTCGCCAGCGACACTGG
TACATCCAGAGCACTTGTGCTACAACAGGGGAGGGACTGTATGAAGGCCTGGACTGGCTGTCCAGCAACATTGCCAACAAGTCCTAAATTTTCGTCAAGA
TTTTGAAGGAGCTAGGAGCGCTTTGGATGGACGATTGAATCACCGGGTACCTAGGGATTGTGTTGGGATGGGATGGTGCTATGCTATTCCCGTATGTACT
GTGTATTTTCCTGAGATCAACAGCTACTGAGCCAGCTCCGGCTGTGGTTTCACTGTCATACTATTGTTTTATTGTATTTTGAGCCCTAAGATGTTTCTTC
TGAAGTAAACAGCTAAAGAGAGTCCTGTTCAATTTCGTAATAAGTGTTCCAAGCATCTGTCTGTCTATCTATGCCTGTATATATTCAGCACTGCTCAACT
TTAAAAAAAAAA
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