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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig3623  (registered. 2012)
Contig Information
Length 1695 bp
Clones alternative view 114 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 6
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 2
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 2
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 2
Wh_SHC Shoot grown with cold treatment 5
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_VABA Shoot with ABA treatment 1
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 4
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_CA 2
WH_SP 1
WH_XA Root 6
WH_XB Root 4
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 11
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|6015054|sp|Q40034.1|EF1A2_HORVU|EF1A2_HORVU RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 885
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig3623
TTCGGCACGAGGCCCCGCCGCGTCTTTGACTCCATCGCCTCCTCCCTCCCCCTCCCTCCTCGTCGCCGGCCAGCCAGGTAGTTCGTAGCTCCAGCAGCCA
TGGGCAAGGAGAAGATCCACATCAGCATTGTGGTCATTGGCCATGTCGACTCTGGCAAGTCAACCACGACTGGCCACCTCATCTACAAGCTTGGAGGCAT
TGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCCGCTGAGATGAACAAGAGGTCTTTCAAGTACGCCTGGGTGCTTGACAAGCTCAAGGCTGAGCGT
GAGAGAGGTATCACCATTGATATTGCTCTGTGGAAGTTCGAGACCACCAAGTACTCGTGCACTGTCATTGATGCTCCTGGTCACCGTGATTTCATCAAGA
ACATGATCACTGGTACCTCCCAGGCTGATTGTGCTGTGCTTATCATTGACTCCACCACTGGTGGTTTTGAGGCTGGTATCTCCAAGGATGGCCAGACCCG
TGAGCACGCTCTCCTTGCTTTCACTCTTGGTGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGATGCCACCACTCCCAAGTACTCGAAGGCCCGTTAC
GATGAAATTGTCAAGGAAGTCTCTTCATACCTGAAGAAGGTCGGTTACAACCCTGACAAGGTTCCCTTTGTCCCCATCTCTGGGTTTGAGGGTGACAACA
TGATCGAGAGGTCCTCCAACCTTGACTGGTACAAGGGCCCAACCCTGCTTGAGGCGCTTGACCAGATCAATGAGCCCAAGAGGCCCTCCGACAAGCCCCT
GCGTCTTCCCCTTCAGGACGTGTACAAGATTGGCGGCATTGGAACTGTGCCAGTGGGGCGTGTTGAGACTGGAGTCATCAAGCCAGGCATGGTTGTCACC
TTTGGTCCTACTGGCCTGACCACTGAGGTGAAGTCTGTGGAGATGCACCACGAGTCTCTCCTGGAGGCGCTTCCTGGTGATAATGTCGGCTTCAACGTCA
AGAATGTGGCTGTCAAGGATCTCAAGCGTGGGTACGTGGCCTCTAACTCCAAGGACGACCCCGCCAAGGAGGCTGCCAACTTCACCGCCCAGGTCATCAT
CATGAACCACCCCGGCCAGATCAGCAACGGCTACGCCCCGGTGCTGGACTGCCACACGTCCCACATCGCTGTCAAGTTCGCTGAGATCCAGACCAAGATC
GACCGGCGGTCTGGCAAGGAGATTGAGGCGGCGCCCAAGTTCCTCAAGAACGGTGATGCCGGGTTCGTCAAGATGATCCCCACCAAGCCCATGGTGGTGG
AGACCTTCGCCCAGTACCCTCCCCTGGGTCGCTTTGCTGTGCGTGACATGAGGCAGACGGTCGCCGTTGGCGTGATCAAGAGCGTGGAGAAGAAGGATCC
GACCGGCGCCAAGGTGACCAAGGCTGCGGCCAAGAAGAAATGAGATGGTGTCGGGCGGTGGCGTTGTTGGTGGTTCTTTACCACATCTATGGTGGTGGTG
GCGGTATACGGTGGTGGTGATAGTCGTGTTAGCCGATTTGCGAACTTGTTAAGCTTTGGTTATTTGTGTCGAGCAGTGTTCGAACTGCTTATTACTGTGG
TCATAGTATCGTTCGGTTGTGTTGGTGAAACTTCGTCAGATAAAGTTGCTATTTTATATTTGAGTGATATTTGGAGTCGTTTTATAAAAAAAAAA
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