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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig35912  (registered. 2012)
Contig Information
Length 1180 bp
Clones alternative view 64 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_r Root 1
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_KMP Shoot grown under continuous light 3
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 1
Wh_VSCB Liquid cultured tissue 6
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XT Roots, 18 day old plants were grown hydroponically 5
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 1
WH_XA Root 5
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115441607|ref|NP_001045083.1|| Os01g0896800 [Oryza sativa (japonica cultivar-group)]
Score 545
Evalue 4.00E-153
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig35912 
GAATTCGGCACGAGGCTCGCCCGCCCGCCCGCGCCGCCGCCGCCTCCTCCATCCGCAGGAGCTCCCTCCTCGCAGGCGCGATGGTGTACATCAAGAACCA
GAAGACAAGGGCGTACTCCAAGCGTTTCCAAGTCAAGTTCAAGAGAAGGCGCCAGGGGAAGACCGACTACAGGGCCAGGCTGAGGCTCACAAACCAGGAC
AAGAACAAATACAATACCCCCAAGTACCGTTTTGTTGTGCGATTTACCAACAAGGATGTCACTGCACAAATTGTGTATGCTACCATTGCTGGTGATATCG
TGATGGCCGCTGCTTACTCCCATGAGTTGCCTCGCTATGGTCTTGAAGTTGGCCTCACCAACTATGCTGCAGCCTACTGCACTGGTCTGCTTTTGGCCCG
TCGTGTGCTCAAGAACCGTGATCTTGATGAGGAGTATGAAGGCAATGTTGAGGCCACTGGCGAGGACTTCTCTGTTGAGCCTTCTGATGAGAGGAGGCCT
TTCCGTGCGCTTTTGGATGTTGGTCTTATTAGGACCACCACTGGAAACCGTGTGTTTGGTGCCCTTAAGGGAGCTTTGGACGGTGGTCTTGACATTCCCC
ACAGTGACAAGAGATTTGCTGGTTTCAAAAAGGATGAGAAGTCGCTGGATGCTGAGATTCACCGCAAGTACATCTTTGGAGGGCATGTTGCTGACTACAT
GAGGTCACTAGCAGATGAGGAACCAGAGAAGTTCCAAACTCACTTCAGTGAGTACATCAAGAGGGGAATCTCAGCTGATGACATGGAAGCAGTTTACAAG
AAGGTTCATGCTGCCATCCGTGCTGATCCCACCATGGCCAAATCAACCAAGGCGCCTCCCAAGACTCACAAGAGATACAACCCCAAGAAGCTGACCTATG
AGCAGAGGAAGGCCAGCCTCGTTGAAAGGCTCAACGCCCTCAACAACTCTGCGGGTGCCGCCGATGACGATGAGGACGACGACGAGTGAAGAGCTCTTTG
TCCACCCCAGTGTAGTCTTGCAACGTGCGTTTTTGTTAAAGTCCGGCACTCTGCACAATGACCTGTTCCATTGAGTTCTGTTTGTCCTGCTGGAGTTATA
GATTGTGTTATCTGGGTTATGTGCCGTGCTGGCATTTGGATCTTAATCTTAATCCGTTCGTCTTGCACCCAAAAAAAAAA
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