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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig35491  (registered. 2012)
Contig Information
Length 877 bp
Clones alternative view 105 Clones [Download: TSV  ,  FASTA ]
Wh_SH - 12
Wh_KMP Shoot grown under continuous light 7
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 7
WH_XN Leaves, plant was grown at constant 23Ž 18
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 8
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_SP 1
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 8
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 10
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|548605|sp|P36886.1|PSAK_HORVU|PSAK_HORVU RecName: Full=Photosystem I reaction center subunit psaK,"
Score 243
Evalue 3.00E-62
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig35491
CACCGGCAGGAGCCCCGCCGTGGTTCCCCGCGGGGCCGGTGGCGCCGCCGTGCCCGGTCGNNNTGTTGGTCGCGTCCATTATCCTTGATTTTCACGCACT
TTACTCCGATCGATGTGCTACAAGATGAACTGGTGGTGTATCGTGTTGTATTGTATTGTCGTCGATCGCAGCATCCACAGCACACAAATCCGCAGCCATG
GCTTCCCAGCTCTCCGCCATGACCTCCGTGCCGCAGTTCCACGGCCTCAGGAGCTACTCCTCGCCCAGGTCCATGGCGACGCTGCCGTCCTTGAGGAAGA
GGTCCCAGGGCATCCGCTGCGACTACATCGGCTCCTCCACCAATATCATCATGGTGACCACGACGACCCTGATGCTGTTCGCCGGGCGGTTCGGGCTGGC
GCCGTCGGCGAACAGGAAGGCGACGGCGGGGCTCAAGCTGGAGGCGCGCGAGTCCGGGCTGCAGACGGGCGACCCGGCCGGCTTCACTCTCGCCGACACG
CTCGCATGCGGCTCCTTCGGCCACATCTTGGGCGTCGGCATCGTGCTCGGCCTCAAGAACACCGGCGTCCTCGACCAGATCATCGGCTAGAACCTTCCTT
TTCCGTCGATAGCTGTTCTGCATCCGCATCGCGCGCTCCATGTAGTGGATCAATTAATGCTCCCTTTGTGATTTGATGATGTGGTGTAGTACAATGTATG
TATGTGTATGCATCTTTGTTTCAGCGGGACGTACCGCCGCGCCGGTGTGGCAACTGCTTCATCCCATGCGTTTTTCATCATCTATAGTATCTTTCACATG
GTGAAAAAAAAAATGTGCTATAGAAAGAGCAACATAAAGTCCAAAAACTAAATTAGTACTCCCACTGTGAAGAAATA
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