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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig35049  (registered. 2012)
Contig Information
Length 1730 bp
Clones alternative view 22 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_SH - 1
Wh_SHDr Shoot grown with dessication 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VWD Shoot grown with dessication 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|50509325|dbj|BAD30783.1|| putative SHOOT1 protein [Oryza sativa Japonica Group]
Score 491
Evalue 2.00E-136
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig35049 
GTTGATCAGATCAGCCTTATCTTGCTTTGCTCTGATTCTAGTTACTTCAAGCCACTGTTTGAGATAATATTTCCATGAATCGGTTAACCAAAGTTGCAGG
GAGGCTTGGAAATTGATCATAATAAAGCTCTTGTGATGAAGAATCTGCATAAATTCTTCAATAGAGATGACCTGCCCTGGTTTAACCTTATTTGGTAAGT
GCATTACTCCTCTTCTCTCCCACAAGACAAGGTGGGCTCCTTTAGGTTGAAGACCCACCTCAACCTACTCCAGACTTACAAACAGTCATGTCTGTGCATT
GCAAATTCTGAGAGCACCATCCAGTTCTGGAGCGATAAATGGAGTGAGGAACCACTTCAACAAAGACTCCCAGGTAAAACGTGTTTTGTCCGTCAAAAGC
TGGCTCTTGTGTTCACCAGAAAATATATCCACATCCCGATTGGTACTTCAAGCACGATAGCTAGTACGTCACAACTTACAAGCACGATGGTAACATATTT
CCTGTAGCCTTTGCTTTCCGAATGGAGGATTGCCATTGTTATGTACAAAGTGTATGTTCATAGAATGGTTGAAGTACAAAGGAAGGCTAAAAACATTCCT
GGAGATATCTCCCAAGGTTAAAAGCAGGGGGGGGAGGCTGGGCGGTATGGCCAAGTGTGCAAAAGACCAAGTAGATGTGTGCAATCGATAGGAGGTCATC
ACTTCTTACCGAATCCAAATATGGATTTGATAGCATTGATGGCGTTCTCGTTGATAAATGATTCATCGTACTTGTTTAGTAGGGTGGCGAACTCCTCCGA
GTTCCTCAAGTTTGCTAAATCCGGGTCGGTGTGAATCCTCTTGAAGTCTTCATAGCCTGCCTTCATCGCTTCTTCAAGTGCAGAAAGGCCAGCTTGTATC
CGGTCGAGCTTCGAATAACAGCAGGCGACATTGTAGCTGGCTACGGAAGCTTCATCAATCTCTGGTTTTGACCCCAGCACCGACTCGAACTTCTCCAACG
CGTCCTCGTATTTTCCATCCTTGTACAGCTTTAGCCCCATGCGAAGGTCATCTTCTCTTTGGATCTCCTGCTCCATCTTCTTCTGGTAATTTTGCATCTG
AATCTCTCTGAGTTTAGTGCTGACATTTCCGGTGTTCCTTTCAGCCCTGATGACCTCCTTGTCAGAGAGCTCTGCAGCACCATCCCATTTCCCAAATTTC
TTCTGCATCTTCATGTAGAGAGGGCCAACTCTCTGGCGGATGCAGTACATGGTCTGGCCGTACCCTGCCGCCGGCCAGATTTCCTCTCCAAAGACGGCGC
TGGTGGCAATAACCTTGTCGCCGACGGTGAACTTGCCGGTCTGCTCGGCGGATGAGCCGGGGAAGATGGCCTCGATGTAGGTGCCGCCGTCGCGGCCCTT
GGCGAACTTGAGCCCGTACGGCTTCAGGATCTCCACTTCGTACTCCTCGTACGGCTCCTGGCCTCCATCCCCGTCCCCACCTCCGGACTTGGGCTCCGCC
TGCGCTGACGAAGACGCGCGGACGACGACGCATCTCATCGCCGTATCCCGAAGCTTCAGGCAGCAGCTGTGGCCAAGAAACGCCGTCCTCGCCGTCCGCG
CATTGCTACCGTTGGTTCTTGCGAGGCACGGCGGGGAGGAGAGGAGCGGCTGGTTGGTGATCTGGTGGGCGAGAGCCATTTCAGCTAGCTAGCTGGGAGC
TTTGGGCTCTTGGTTCCTCTGCGAATTGAA
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