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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig35046  (registered. 2012)
Contig Information
Length 2130 bp
Clones alternative view 331 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 6
Wh_r Root 7
Wh_yd Spikelet at late flowering 12
Wh_CSEC Callus 5
Wh_DPA20 Seed DPA20 15
Wh_EM Dormant seed with water absorption 15
Wh_EMI Dormant seed with water absorption after breaking 8
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 16
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XN Leaves, plant was grown at constant 23Ž 30
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 25
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 20
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 20
WH_XR Roots, 18 day old plants were grown hydroponically 13
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_XT Roots, 18 day old plants were grown hydroponically 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 11
WH_XA Root 6
WH_XB Root 4
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23Ž 12
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 14
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 10
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1657859|gb|AAB18209.1|| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
Score 527
Evalue 2.00E-147
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig35046 
ATGGTAGTACAACTCAGATTGCACACCAATACGCTTTGGGGCGTGCACAATCTTCAAGACATCTTACTTGCCGGGGACAAAGTTGGTGGCGAATGCCCAT
GCGTTATTGTTGACGGGGTCAGCAATGTGGTCAGCGAGGTTCTCAAGTGGGCCCTTGCCCGTGACGATAGCTTGGACAAAGAAGCCGAACATTGAGAACA
TGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAACTCAGCAAATGCCTCGGGGTCGTCGGCTAGGCCGAGAGGGTCGAAGCTGCCTCCTGGGTATAG
TGGGTCGACGATCTCGCCGAGTGGGCCACCGGCGACGCGGTACCCTTCAACGGCACCCATGAGCACGACCTGGCATGCCCAAATAGCTAGGATGCTTTGC
GCGTGCACAAGGCTAGGGTTGCCGAGGTAGTCGAGACCACCCTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACAGCCTCGCCGAACTTGACGCCGT
TGCGGGCGAGCAACTCAGGGAAGACGCAACCAAGTGCCCCAAGCATGGCCCAACGACAGTGGATCACCTCCAACTCCCGGTTCTTGGAGAAGGTCTCGGG
GTCAGCCGAAAGTCCGGCTGTGTCCCACCCATAGTCACCTGGGAACTCACCTGTCAGGTAGCTCGGGGGCTCACCGGAGAGTGGGCCGAGGCAGAGCACA
CGGTCAGCACCGTACCATGGGCTGCCAGAAGAAACCTGCTTCACCTTCGTTGCGGTCTTGCGCATGGTGACTCGGGCCTCGCCAAAGAGAGCCAAAGATG
GAACGTTCGTCACCACCTTGCCGGCAAAGGTCGAGGAGGAGAGGGACATGGTGGCTGCCGCCATTGGAAAGCTAAGATGAATTCGGCACGAGGCTGACAT
GCGTGCGAGTCGACGGGTTCTGAAACCTGGGATGCGCAAGGAAGCTGACGAGCGGGAGGCCCTCACGGGCCGCACCGCTGGCCGACCCTGATCTTCTGTG
AAGGGTTCGAGTTGGAGCACGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCGA
TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCT
GGAGCCCATTACGAGTTCTATCAGGTAAAGCCAATGATTAGAGGCATTGGGGACGCAACGTCCTCGACCTATTCTCAAACTTTAAATAGGTAGGATGGCG
CGGCTGCTTCGGTGAGCCGTGCCATGGAATCGGGTGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTAC
GGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGT
AACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCCGGCCATCTGGGCGAGCGCCATGCCCCGATGAGTA
GGAGGGCGCGGCGGCCGCTGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACC
CCGTACAACCCAGACTACCTGGACGAGTCGGTGCTGTGGACGGAGAGCAGGGACGTGGGCAACGGGTTCAGGTGCGTGCGCATGGTGAACAACATCTACC
TCAACTTCGACGCCCTCAACGGCGACAAGTACCACGGCGGCGTCCGCGACGGCACCGAGGTCGTGCTCTGGAAGTGGTGCGAGGGCGACAACCAGCGCTG
GAAGCTCCAGCCGTACTACTGAGCGAGCCAGCCAGCGCGTGCCATGCATGCGTGCGTGGCTCGTGCACGGTGCACGCACGCGTGGAGATCGACATGCCCA
AACCTACCCATGCCGTACGTACGTATCTACTAGTACTACTGAAGAAACGATGTGGACTGTCCCGGATAAACAACATGCATGCGTCTCTCGCTACCTACGC
CGCAGAATAACGGAGCCAGCTGTGTTGTGC
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