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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig33176  (registered. 2012)
Contig Information
Length 775 bp
Clones alternative view 68 Clones [Download: TSV  ,  FASTA ]
Wh_oh Pistil at heading date 1
Wh_r Root 2
Wh_OKCS Seed DPA5 2
Wh_VHS Shoot with heat shock treatment 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 13
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XV Leaves, plant was grown at constant 23Ž 5
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|124295114|gb|ABN04099.1|| Rpr4901.2 [Hordeum vulgare subsp. vulgare]
Score 164
Evalue 1.00E-38
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig33176 
CCGGGAGCATCTCCATTTCTCTATTATCTCTCTCCCTCTCGCGCTCCTACCGAAGTGTACTACCAAGTAGCAGCGACCTGATTATATAGCACGGCAGGCC
GGTCGTCGCCTCGTCTCGCCGGGAGAGGATAGGCACAGGCGAGCACAGAGAGAGGGAAGCAGCTGATCCCAGCCGGAGAACCGTCCATCCGCCATGAGCG
ACGGCCAGGGCAATGCTCCTCCTGGAGGCTACTTCATCGGCCGTCCGGTAAACACCGACGAGACCAAGGAGAAAGAACCGCCGCAGGCCGTCCCTGAGCC
TGCTCCAGCTGCGCTGAATACCCCTGGTGATTACTTCGTCGGCCGCCCGTCGAACCACGAGCAGAACACGGCAGCGCCGCCGGCTAAACCGAGCTTCTTG
GCCAAATTCTGTCCATGCCTCGCCGGCGGTGGAGCTACCAGCTAGACCGACCGGCCCAGCAGCCGTGCGCCGTGCGCGTGACCACGGGAGGATTTGAAGT
GGAATCTCAATTCTGTATTGGAACTGTGCGAGGTCTCTTCATCTTTGGAAGCTCTGCTCTGTTTTTCCTTCTTTCTCTAGCATTTGATTCCTGCGTATTC
ATTCGTGTAATGCCGACAAACGTAAACTCGACGAAACTGCAATCCGTCCATGTGAAATGAAAATGATGTTGATTTGTTCAATTGTAAAAAAAAAATACTG
ATGTGGACTGCGGATTTATCGCCGTCGCGTGTTGGCGTGTAAACATATATCGAACTCCACCGGAACAATTCGTGT
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