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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig32783  (registered. 2012)
Contig Information
Length 1576 bp
Clones alternative view 29 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 3
Wh_h Spike at heading date 1
Wh_SHDr Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XV Leaves, plant was grown at constant 23Ž 4
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115435104|ref|NP_001042310.1|| Os01g0199400 [Oryza sativa (japonica cultivar-group)]
Score 645
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig32783
GCACAAAAAAACGCGCAGCGGTGGGAGAGCCAGAGCCATGGAGACGGGCGGCGACGAGATGATGATGACCTCGGGCGCCACGGGCCGGATCGTGCCCGTC
TTCCGCTCCGTGCTGTCCCGCCGCGCGCTGCTCCGCCTGGCCGTCGCGCTCCACTCGCTCTTCCTCTGGCTGCTGCTCCTCGTCGGCCGCCGCCGCCGCC
CCGACGCCGCGAGCCCGGCGGTGGAGCCCGGCCGGCTCGGGAGGGCCAGGAGCCGGCGCAGGGCCGCGGAGGAGGAGGACGTGCGCCGCCGCCGGGCGCT
CGCGGAGGAGGTGCCCATGGCGGAGGAGGAGGACGGGGACGGGAGGACGTGCGGCACCTTCGTCGTCGCCGGGGCCAGGCGGAACGCGCTCTTCTGCCGC
GTCTGGGCGCCGGCGGCCGGCGCCGAGATGAGGGGCGTTCTGCTCATCGTACATGGGCTCAATGAGCATAGTGGGAGGTATTTGCATTTTGCCGAGCAGC
TAACGTCATGTGGCTTTGGAGTATATGCAATGGATTGGATAGGTCATGGTGGCAGTGATGGTCTGCACGGTTATGTTCCTTCACTTGATTATGTTATAGA
AGACATGGAAGTACTCCTTGATAAAATTATGCTGGAGAATCCAGATGTTCCTTGTTTTCTACTCGGTCACTCAACTGGTGGAGCTGTTGTTTTAAAGGCG
TCGCTGTACGCTCACATCAGAACCAGACTGGAAGGGATCATCCTGACTTCACCAGCTGTGCGTGTAAAACCAGCGCATCCGATTGTTGGGGCCGTGGCAC
CGATATTCTCTCTGATAGCACCCAAGTTCCAATTCAAGGGAGCAAACAAGCGGGGCATTCCGGTGTCTCGCGACCCCGCCGCGCTGCTGGCGAAGTACTC
TGACCCACTGGTCTACACCGGGCCGATCAGGGTCCGGACGGGCCATGAGATCCTGCGCATATCCTCCTACCTGCTGCACAACCTGAAGAAGGCGACTGTC
CCGTTCATGGTCCTGCATGGCACCGCGGACCGGGTGACGGACCCGCTGGCCTCGCAGGAGCTCTACACGGAGGCCGCGTCGAGGCACAAGGACCTGAGGC
TGTACGAGGGGTTCCTCCACGACCTGCTCTTCGAGCCCGAGCGCGACGAGATCGCCGCCGACATCATCGGGTGGATGGACCGGACGCTCGGTCTGCAGGC
TGTATGAGTGGTAGTTGTTGTCTGAATATGGGGAGGAGATGGGCATCATGTGTAGGCCGCTCAGATCGCGGCAATGGGATTGCAGTCATGGGCTTCATGG
CATGGCATGGCAAGGCATGCATGATGGCTTTGATCTGATTCTTGCCGGTGTTTTCTGAAAGTGGTCTGCAGATTGCCTGTGATATTCTTCCCCATCTTAC
GATGCTGCCGATTGCAGACCAATGAATTGGGAAGCCGGTGGCTTGTGCTTTGTATGAATGCTGCAATATATATCTATAATAACAAAAGGGGTGGGAAAAA
AAATAAGGGTAATGCTATTCAGCGGACGTTCGCTAGGGGGGTGGCCATTTGCGAGCGTTTTTCACGGCGTCTTATG
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