Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig32602  (registered. 2012)
Contig Information
Length 792 bp
Clones alternative view 31 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23Ž 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115450991|ref|NP_001049096.1|| Os03g0169100 [Oryza sativa (japonica cultivar-group)]
Score 426
Evalue 1.00E-117
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig32602
AGAGAGAGAGAGAGTTTTGGTTGGTGGACACGCACAGTACAGATGGCGTCGCCCTCCTCCTCGCTCTGCTCCAGCCTCGGCTACCCGCGCGCCGCCTCCC
TCGGCGCCCGCCGCCGCGCCGGCTTCTCCTCGTCCAGGAAGCTATTCCAAGTGAAGGCATCAAGGGTCGACAGTTTCTCCAAGAGCGACATCATTGTGTC
CCCTTCCATTCTCTCTGCAAACTTCGCCAAGCTTGGTGAACAGGTAAAAGCTGTGGAGGTGGCAGGATGTGACTGGATTCATGTTGATGTCATGGACGGT
CGCTTTGTGCCAAACATCACGATTGGACCATTGATTGTTGATGCTCTGCGTCCAGTGACTGATCTTCCATTGGATGTGCATCTGATGATTGTGGAACCTG
AGCAGCGAATTCCAGATTTTATCAAGGCAGGTGCTGATATTGTTAGCGTCCACTGTGAGCAAACAGCAACCATCCATCTGCACCGAACAGTCGACCAGAT
TAAAAGTCTAGGAGCAAAGGCTGGAGTTGTCTTGAACCCCGGGACCCCACTCAGTGCGATAGAATATGTACTTGAATCTGTTGATCTGGTATTGATTATG
TCAGTCAATCCTGGTTTTGGTGGGCAGAGTTTTATTGAGAGTCAAGTAAAGAAAATCGCCGATTTGAGAAAATTATGCGAAGAGAAGGGAGTGAACCCCT
GGATCGAGGTTGATGGCGGAGTCAGTCCCAAAAACGCCTACAAGGTCATTGAAGCTGGAGCGAATGCCCTTGTTGCTGGTTCTGCGGTCTTC
page-top