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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig31851  (registered. 2012)
Contig Information
Length 1656 bp
Clones alternative view 161 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 10
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 6
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 14
Wh_SH - 2
Wh_CSEC Callus 7
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_OKCS Seed DPA5 4
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 6
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 9
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 8
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_CA 1
WH_SP 12
WH_XA Root 4
WH_XB Root 3
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|399414|sp|Q03033.1|EF1A_WHEAT|EF1A_WHEAT RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha
Score 895
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig31851
TTTTTTTTTTAAGCAGGTAATCATATCCATCTATTAAGAGCATTCAACACAGGCAGACAAAACCACAAATGGGATAAGAGCACAATAATGGAATCGAAAT
AGAGTATTTAAACGACACATCATAGCTCGCACACAGGTGCAGGAGTCGGAAGTGCAACAACGCCCAGGAACACCACTTAACATACACTAAGATTCTCCAA
AAAAGACTTGACACTAAAACTTCTGCTAGATAACTCGATGGCAGACACCAGAGCACTCATTTCTTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGG
GGTCCTTCTTCTCAACGCCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCACAGCGAAGCGGCCAAGAGGTGGGTAGGTGGCGAAGGTCTC
CACAACCATGGGCTTGGTGGGAATCATCTTCACAATACCAGCGTCACCGTTCTTCAGGAACTTGGGCGCAGCCTCAATCTCCTTACCAGATCGCCTGTCA
ATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGA
TGATGACCTGAGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGTCATCCTTAGAGTTGGATGCAACAAACCCACGCTTCAGATCCTTGACAGCAACGTTCTT
CACGTTGAAGCCGACATTGTCACCAGGAAGCGCCTCCAGGAGGGACTCGTGGTGCATCTCAACGGACTTGACCTCAGTTGTCAGACCAGTGGGGCCAAAG
GTAACAACCATACCAGGCTTGATGACACCAGTCTCAACGCGTCCAACAGGCACAGTTCCAATGCCACCAATCTTGTAAACATCCTGAAGGGGAAGACGCA
GGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCAT
GTTGTCACCCTCAAACCCAGAGATGGGAACGAAGGGAACCTTCTCAGGGTTGTAGCCGACCTTCTTCAGGTACGAAGAGACTTCCTTGACGATTTCCTCA
TAACGGGCCTTCGAGTACTTGGGAGTGGTGGCATCCATCTTGTTGCAGCAGCAGATCATCTGCTTCACTCCAAGAGTGAAAGCAAGGAGGGCGTGCTCAC
GGGTCTGGCCGTCCTTCGAGATACCAGCCTCAAAACCACCAGTGGTGGAGTCGATGATGAGCACAGCACAGTCAGCCTGGGAGGTACCGGTGATCATGTT
CTTGATGAAGTCACGGTGACCAGGGGCATCAATGACGGTGCAGTAGTACTTGGTGGTCTCAAACTTCCACAGGGCAATATCAATGGTGATACCCCTCTCG
CGCTCGGCCTTCAGCTTGTCAAGCACCCAGGCGTACTTGAAGGACCTCTTGTTCATCTCAGCGGCTTCCTTCTCGAACCTCTCGATCACACGCTTGTCGA
TACCTCCAAGCTTGTAGATCAGATGGCCAGTGGTGGTCGACTTGCCAGAGTCGACATGGCCAATGACCACGATGTTGATGTGAGTCTTCTCCTTACCCAT
GGCTGAAACTGGAAGGAAGGAGAAGGAGCCGAGAGGAGGAGGAGGAGGCGGCGGCG
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