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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig31216  (registered. 2012)
Contig Information
Length 818 bp
Clones alternative view 92 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 2
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 6
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 7
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 10
WH_XA Root 2
WH_XB Root 1
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115456441|ref|NP_001051821.1|| Os03g0835900 [Oryza sativa (japonica cultivar-group)]
Score 239
Evalue 3.00E-61
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig31216
TTTTTTTTTTAAAACCATCAAACTGCTTTATGATGCCATCAGTCACAGCCAGATTTTATTCGCCTTCTCCATGGGTGGCCTCTTCACCCAACAATCTTAA
CCACCTCCGACTAATAACGACCAAAGCACGCACACAGGCAGGCACGGGATAAACAACCACCAAGGTTTGTTCTACTCAACACACAACCAACTGGGGGCAC
CAGAGATGAGAGCCCTCCTAATACAGGTCGCCCTCCTTGTGGGTGTGGATGACGCAGTCCGACTTGGGGTAGGCCACGCATGTCAGCACGTAGCCCTCCT
CCTGCTGCGCGTCGTCCAGGAACGACCCGTCCGACTGGTCCACCGCGCCAGCCTCGATCTTGCCCGCGCAGGTCGAGCACGCCCCCGCCCGGCACGAGTA
GGGCAGCTCCACCCCCGCCGTCTCCGCCGAGTCCAGGATGTAGGCGTCGTCCGGCGCCTCAAACTCGTGCTCGTCCCCTTCCGGGGTCACCAGCTTCACC
TTGTACGTGGCCGCCGCGGAGACGTCCAGCTTCTTGGAGGGGAAGGAGGACCTCAGGCTCCGCAGCTGCGGCGCGCCTCGGCCGAGGAAGCTCAGGCGGC
TCTTGACCGCTTTCTGGGGGGCATCGGTTGTTCGAGCATTGCCCAAGAGGGCACAGGAAGCTGCAAACGTGCAGGTTGACATCTTGAAACCTGTGGCGGC
CGGCCGGCGAGGAGGGACGGGGCGGCGGCGGCGGCGGCTTCCCTTGCCTCCTCCTCGTGCTCCTTGCGTGTGTTCTCTCTGTCTGGTGGTGGTGTGGTGG
GGGTGGGCGGCGGCGGCG
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