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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig30775  (registered. 2012)
Contig Information
Length 1488 bp
Clones alternative view 327 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 11
Wh_e Seed DPA10 18
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 3
Wh_r Root 12
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 10
Wh_DPA20 Seed DPA20 15
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 9
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 10
Wh_OKCS Seed DPA5 6
Wh_PCDAM Anther at meiosis 13
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 8
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 18
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 6
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 9
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_CA 2
WH_SP 32
WH_XA Root 14
WH_XB Root 20
WH_XC Root, treated at 50 microM Al for 6h 14
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 8
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 5
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|49343245|gb|AAT64932.1|| cytosolic malate dehydrogenase [Triticum aestivum]
Score 655
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig30775
CATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCGCGCGGCAAGAATAAGGGAT
ACGAATTCCCTGATTTTCTAATTGCTCCAGCAACCGTTGTCGTCGCCTCCTCCTAAACCACTCTCCCTATCCCCGTGTCCAGAATCTACCCCCCGGCTCC
AATGGCGGCGAAGGAACCGATGCGCGTGCTCGTCACCGGCGCCGCAGGACAAATCGGATATGCTCTTGTTCCCATGATTGCCAGGGGAGTTATGCTTGGT
GCAGACCAGCCTGTTATTCTGCATATGCTGGATATTGAATTTGCTGCTGAAGCTCTTAAAGGCGTCAAGATGGAGTTGATCGATGCCGCATTTCCACTTC
TCAAGGGAGTTGTTGCAACAACTGATGTTGTTGAGGCTTGCACTGGTGTGAATGTTGCGGTTATGGTTGGTGGATTCCCCAGGAAGGAAGGAATGGAAAG
GAAGGATGTTATGACGAAAAATGTTTCAATCTACAAAGCTCAAGCATCTGCTCTTGAAGCTCATGCAGCCCCCAATTGCAAGGTTTTGGTTGTTGCCAAC
CCAGCAAACACCAATGCTCTCATCCTGAAGGAGTTTGCTCCATCTATCCCTGAGAAGAACATCAGTTGTTTGACCCGCCTAGACCACAACAGGGCACTCG
GTCAGATTTCTGAGAGACTTGGTGTCCAAGTTTCTGACGTTAAGAATGCTATTATCTGGGGTAATCACTCGTCCAGTCAGTATCCTGATGTTAACCATGC
CACTGTGAAGACTCCCAGTGGAGAGAAGCCTGTTCGTGAACTTGTTCAAGATGATGAATGGCTAAATGGGGAGTTCATTGCCACTGTCCAGCAGCGTGGT
GCTGCAATCATCAAAGCGAGGAAGCTCTCCAGTGCTCTCTCTGCTGCCAGCTCAGCTTGTGATCACATCCGTGACTGGGTTCTGGGAACCGCTGAGGGAA
CATTTGTTTCCATGGGTGTGTACTCTGATGGTTCATACGGTGTGCCTGCTGGTCTTATCTACTCCTTCCCAGTAACGTGCAGTGGTGGTGAATGGACAAT
TGTTCAAGGGCTCCCGATCGATGAGTTCTCGAGGAAGAAGATGGATGCGACCGCCCAGGAGCTGTCAGAGGAGAAGGCGTTGGCCTACTCATGCCTGGCG
TAAATCCACATTCGAAGGGCAGCTGCTCCTCTGGATGTTTTGAATAAATGAAACCTTCCGCTCTTTAGAAACTCTCGTCTCCACCCAGAACAGCCGCACA
TCGCGATGCATGCTCCTTTTCGCTGGTTTTCCAAGTGTGTATGAATGAGGCTTGTAGCTCCCCTTTTGCCTGATGATTTACAGGACAGTACATTTGCTGC
AAGAGTGAAACAATTTGACACCTGATTAGAATCAACTTGTTTTTCTCTTGAAGCATCTACAACAAGTCACATAAAAACTCCCAAAAAC
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