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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig29928  (registered. 2012)
Contig Information
Length 1789 bp
Clones alternative view 66 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 3
Wh_oh Pistil at heading date 5
Wh_yd Spikelet at late flowering 1
Wh_DPA20 Seed DPA20 3
Wh_EM Dormant seed with water absorption 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 3
Wh_VABA Shoot with ABA treatment 2
Wh_VWD Shoot grown with dessication 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XA Root 3
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 1
WH_XV Leaves, plant was grown at constant 23℃ 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115447367|ref|NP_001047463.1|| Os02g0621700 [Oryza sativa (japonica cultivar-group)]
Score 779
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig29928
ATTATTTCATTAGAATAACCAAGAGAACGCGCAAACATGGTGCGGTATTGAAAATAATACTCTAAATAAATTTCAGTTTGTATGATTTTAACAGCTTAGG
CTGCGCAGTTACGATGCAAGATGCAGTAGTTGACAGGGCAAATGAAGCGTCAACACGTAGACTGCTGATCCGGGCAAAACAGGTAAATCCTACTTGAACT
TCATAACAGTGGCTGCTCAATTTTGTGCCCATATAGGTTTATTAACACAAAGATCACATGTTTGAAGGAAAACTCCAAGTGGAATCACTCCACTTCAAAA
GAAAATGCACTTCAAGATTTCGGCCCCCGAAATAAGCAAGAGAGCAGCACTCCTCTCGTACCAGTGAAAACAGAACTTTAGACTGATATGGTACAATCAT
TAATCATTTGACCGATGCTTTTACAGCCTTCTCTGCAGCATCATCAAGATCCTCTGCAGTGATCAATGTCATTCCACTTTCCTTAAGAATCCTTTTCCCT
TGGTCTACATTGGTGCCTTCTAGCCGAACAACAACAGGGACCTTAAGATCAACCTGTTTAGCTGCATTCACTATTCCACTTGCTATCACGTCACATTTCA
TGATACCTCCAAAAATGTTCACTAGAATTGCCTTCACTCTATCGTCTGAAGTCAATATCTTAAATGCTTCCACAACCTGTCCCTCGGATGCACTCCCACC
AACATCAAGAAAATTGGCAGGTGTACCACCATGCAGCTTAATGATGTCCATCGTAGCCATTGCCAATCCTGCACCATTCACCATGCAACCAATCTCTCCA
TCAAGCCCGATGTAGTTCAAATCTGCTTTAGCAGCAGCCACCTCTCTGGGGTCCTCCTGTGTTGTATCACGCAGTGCAAATATTTCTTTCTGCCTAAACG
CAGCATTATCATCGAAGTTCAACTTTGCATCAGCAGCAACTAGCTTTTTATCAGCTGTCTCGGCAAGAGGATTTATCTCCAGCATTGTGCAGTCGGTCTT
GCAGAAAAGTTCATATAGCTTCTTAATCTGTTCTATAGAAGATTGCCTGTCTGCTGTCTTTGGTGCCAGACCATCAACAACTTTAGCTGCATCCTCATCA
GTGATTCCCTTGAATACATCAACAGGAACCTTAACGATCTTATCAGGGAACTTCTCTGCAAGATCTTCAATACTCGTTCCTCCCTCAGCACAAGCTATAA
TGAGTGGACCAGCAGTCTTCCTATCAAGGGTGATCGCAAAGTACATCTCATTAACAAGTGACATTTTCTCACATAAGTAGACCTTGCCCACAACCTTCCC
CTGTGGACCAGTTTGTTTTGTTACCAGGACCTGGTTAAGCATTTTAGCTGCAAGGCTTTCAGCCTCCTCAGCCTTAACAATATGAACACCACCCTTTAGT
CCACTTTTGAAAGTTCCCAATCCACGGCCACCGGCAAGGATTTGGCTTTTCACAACTATCTCTTTCTCACTGGGGAAGACGTTCTTCAAAACTTCCTTGA
CCTCCTGCACTGACCCCACCACGGCGCCCTTGGGCACGTTGATCCCGAACTTCCCCATCAACTCCGCGCCCTGGTACTCGTGGATGTTGAGGCGGCGGAG
CTGCTGGTGCTGCCATTTGCCGGCGACGGAGAGGGTGCGCGACGCCAACCTCCCGAGCGATCCGCGAACCATGGCTGCGGCGGCTTGGGCTCCTCCGATC
CGGAAACCCTACGGGCGTGGAGGAAGGCAGGGATGCTGTTTCGCTCCTCCTCTTTGCGGGTCTGATGTTATTCTGTTCTCCCCTCCCCT
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