Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2985  (registered. 2012)
Contig Information
Length 2400 bp
Clones alternative view 85 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_SH - 4
Wh_EM Dormant seed with water absorption 3
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_CA 1
WH_XA Root 2
WH_XB Root 3
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|90025017|gb|ABD85016.1|| vacuolar proton-ATPase subunit A [Triticum aestivum]
Score 1243
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2985
TTTTTTTTTTAATGGCAAATAATAGATATAAATATAGACATTATTGATGTTCGAGTAGATGGACATCGTGCTTATTCCTCTATGAACATGTCCACCGGTG
TTCAATCTTCTTATACAACAAATAATGGTACACATGGTGAAAAAATAATGGCGTGCATCCTGGCGCTGGAGACCAAACAATGTAAAAATCCTGGAAAAAC
AAGTCTGTCTGTCTGTCGCAAAAAAAAGGGGGGAGGGGATCCTGAAACGTAATTCGCATCTACACAAACTCCGGTGAAGCAAAAGCAAATTGCTCGCAAG
TCGTTCACAGCATTTGGTGCTCCTTATTGTTTACACGGTGGCCATACACAATGTTTCCTCTTTCTCTTTTTTACCTAGCCTCGTCTTCTAGGTTGCGGAA
CCCGGTGGTGAGGTCGTCGTACAACTTCTGGAATTTTGCGATTAGGACGTCTTCGCCTTCTGCGGGGTCTTCGAACTTTTGGGATACAAGGCGGTAAAAT
AGATCGCCCATGCGACTCTTTACGACGGCGTAGGTTATCTTGTGTCCATCAGCATTGGCTGCTCGCTCCACGGCCTGATTCGCTAATGTATTGAAATGAA
TAATGTTGCGCATCATCCAGACAGATTTGTAGAATGGACAATACTTGTCATATGGGGTAAAAGCATTCTGTGCCAAATAATCTTCCCTCAGAAGCTTGGC
TGTCTCCAAAGTAATCTTGTCAGATTCTCCCAGTGCATCTTTACCAACAAGCTGGACAATTTCGTTTAGGTCATCCTCTCTCTGCAACACTTCACGAGCT
TTTGTTCTCATGTCAATAAAGCCAGGATCAAACTTTTCATAGTATCCTTCCAAAGCCGTGGAGTATTTTGAGTAAGAAATGAGCCAATTAACAGATGGGA
AATGCTTTCTTTGAGCCAGCTTCTTATCCAGTCCCCAGAAGACCTGCACAATACTGAGGGTAGCAGAGGTAACAGGATCTGAAAAATCTCCTCCAGGAGG
AGAGACGGCGCCAACAATTGTGACACTGCCTGTCCGGTCTGGACTGCCAAGACATTGCACCTTCCCAGCACGTTCATAGAAGGATGCCAACCGTGAAGCC
AAATATGCGGGGTAACCACTATCCGCAGGCATTTCAGCCAAACGTCCTGAAATTTCACGCAATGCTTCGGCCCACCTGGACGTGGAATCAGCCATCATAC
TAACATTGTAGCCCATGTCACGGAAGTATTCAGCAATAGTAATTCCTGTATAAATGGAGGCTTCACGAGCGGCGACAGGCATGTTGGAGGTGTTAGCCAC
AAGCGTTGTTCTTTTCATGACTGACTCTTCACGTCCATCAGGCAACGTCATTGTCAATTGCGGGAAGTCCATAAGGACCTCAGCCATCTCATTTCCTCTT
TCTCCACAGCCCACATAAACCACAGTGTCGGAATTGGAATACTTTGAGAGCGCCTGACTAATGACAGTTTTTCCACAACCGAAAGCTCCAGGAATAGCAC
ATGTTCCTCCAAGCACCGAGGGAAACAGTGCGTCAAGTACACGCTGTCCTGTTAGAAGAGGCGTGTCAGCAGCAAGTTTTGACGCAACAGGCCGTGGTGT
CCGCACAGGCCATGTGTGGAGCATAGTGAACTCCTTTTTGATGCCCTGAAACTCCAATTCCAGCACTGTGTCCTGCAGACTGTACTGACCCGCAGGGGCA
ATGTAACTTATCTTTCCCATAGCACCAGGAGGGAGCGCGATATGGTGCTTCATCAATGTGTTCTCAAATACGGTAGCGTATAGATCTCCATTTGTGATAT
TATCTCCAACACCTAGCTTATTTGGCTGGAACTCCCACTGCTGATCTTTATCAAGAGCAGGGACTGAAACACCACGTGGAATGTAGACATCTCCAGACTT
AATAGCAATAGTTTTCAGAGGGCGCTGGATTCCATCAAAGATGTTTCCAAGAATACCAGGTCCCAACTCACATGAAAGAGGCTTTTTCGTTCTCAACACG
GGATCGTTGACAGTTAGCCCAGCTGTTTCCTCGTAAACTTGAATTGTAGCTGAATCGCCCTCGAGACGGATGATTTCGCCGATGAGGCTGTCGTGGCCGA
CACGGACGAGCTCGTACATGGCGGCACCGCCCATGCCATCAGCCACGACCACGGGCCCAGAGACCTTGCGGACGTAGCCGTACTCGCTCTCGCGCTCGCC
CTCCTCGAAGGTGGTCATGCGGTCGCCGTGCGCCATGGCGGCCGGCGTGCTGGGGTCGTCGGCCGGGGCGGCGTCAGATGGGATCGCGCGGCGGTGTGGG
GAGAAGGGGGAGGCGGTGTCGATCTGGGCTGGAGACGCTTCCTGGAGCCCCGTAGAGGTGGTGATGAAGGGGGACACGAACGATTTCCAGCCACGACTCA
page-top