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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig29006  (registered. 2012)
Contig Information
Length 1017 bp
Clones alternative view 110 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_CSEC Callus 2
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_KMV Shoot grown with continuous light after cold treatment 5
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 6
Wh_V483 Shoot grown under cold condition for 3days 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 7
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 6
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 10
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 18
WH_XT Roots, 18 day old plants were grown hydroponically 12
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XA Root 1
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XF Seedling, infected with leaf rust 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XV Leaves, plant was grown at constant 23 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|20067423|emb|CAC94005.1|| glutathione transferase [Triticum aestivum]
Score 459
Evalue 2.00E-127
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig29006
TTTTTTTTTTGCCAGATGCAAGATCGACGACGCTTCAATTTATTCACGAAACAGCACATCACAACTCAGATCGAAGAGAGTGCACGCTTGTGCATTATTC
ATGACCACGACCCACTAACCATCGCAAAAAGAACCCCGACCAAGTAGTAACAGTTCAAATCTTGGCGTGAAAACAGCTACTCACAAGGCAGAGGAATTAT
TGGATCGACACGATCCTCCGCCATTTTTTGTTTCTTTTGCCATGGTGGAACGACGAGATCTTTAATTAGTTACTGGTGACCGCTATGTTCCACTTTGGAT
AAAGCACCTTAGTGATGTACTCCTCCAGCTCGTCCACCCCAGGTAGCAGCGCCTTGACCGGCTCGGCGACCCTGAACCGCTTCGCCCACGCCGCTAGTTT
CGGCGTCCTCGCCGGGTCGACGAGCGGCCCCAAGCCGGCCAGGCGGCCTACTGCCTCAAACCAGGGAAGATAGCACCCGAGCGCGATGTCGAGGAACCCG
ATGGCGTCACCACCGAAGAACGGCGCCTCCACCTCCCCTTTGGAGCACTCCGCCAGGATAGCTTCCAAGTGTCGGAGCCCGGACAGGGTCTCCTCCACCT
TACCAGCTCTCTCCTCCTGCTTCACTGTCTTGAGGATGCCGGCGCACGAAGGAAACAGCTTGTCGTTTGCATAGGCGGCCCAGAAGCGAGCGAGGGCGCG
GCTGTAGGGGTCTGCGGGGAGGATGGGCTTGCCGTTGCCGGGAAGGCCGAGGGCGTCGTCGAGGTACTCCACGATGAGCAGCGACTCGCAGATGGGCTTG
CCGTTGTGGATGAGGACGGGCACCTTCTTGTACACGGGGTTGGACGCGATGAGGAGGTCGCTCTTGCACCAGCGGTCCTCGGGGAGGTATTCGTAGCTCA
GCCCCTTTACGGCGAGCGCCATCTGTGCGCGGAGCACGTAGGGGCTCACCCCGGGCGCCCACCACCCCAGCAGCTTCAGCTCTTCACCGCCGGCCATCAA
CGTTTCCTCGTCTTCCT
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