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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig28552  (registered. 2012)
Contig Information
Length 842 bp
Clones alternative view 28 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XA Root 1
WH_XB Root 1
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|222628743|gb|EEE60875.1|| hypothetical protein OsJ_14533 [Oryza sativa Japonica Group]
Score 401
Evalue 4.00E-110
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig28552
TTTTTTTTTTGATTATTCAACGCACACTGTCATCCACCCCATTGGTTCATTAGTCGTCCCCACAGAGGTCTCTCCACAGCAACAGCATCCCCAACCCCAA
CTTGAGAAGAAGATTGGGAATGAGCAAAAAGATAATGTACATTTTGTTGTACATAGTAGTACAGAGTTTGTCATACGGTACTGTTTGTGGGTAGGGGAAC
GACGCCGTCGAAGAAATCCCCAAAGTAATGCCGTGGCTCGTGCACCAGCTTGGAGATTATGTCCCTCAGCGTGATCACCCCCTCGGTGTCCCCCTTGTCG
TCGACCACGTAGATCCTGTGGATCTTGGTCGAGTCCAGCTTCAGTATGATTTCCTTGATCACGTCGTCTCTTTTGCATGTGATCACGTCGTGCAGCAACG
GCGACGCTTCGTGTTGCTCCTGGAGGTGGTGCCGGACCGCGGTAAGGAAATCCTTGGCTGAGATTGTCCTGTATTGTTTGTATATCTTGGGGGCACTCAA
AAGATATTGGACATCTCTGATGCTAATGTTACCAATTGCTTTTGTTCCATTTGTGTCAATAACAGGCACACCACCAACCCCCTTTTCCCTCATCAGTTGG
AAGGCTTTTAGGACTGGCTGGTCTTCATTTACCTTAACAAGTTTGTATGGCTTCATCAGAGGAAGGCCCAGTTCAGAGAGTTTCTTGGTTCCCCAGCTTT
CAAACCAAGGAAGTCCAACACACTCTGCAAGCATGTGCACAACGCAAGATTGTGTAATGATATTCTCAATCTGATTCCCCCCCATATCCACCACTGGGAN
NNTCTTCATCCTGTACTTGGATAGAAGAAGCAGCATGGTGAG
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