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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig28166  (registered. 2012)
Contig Information
Length 1510 bp
Clones alternative view 101 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 2
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_r Root 4
Wh_yd Spikelet at late flowering 2
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 6
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 1
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 8
WH_XT Roots, 18 day old plants were grown hydroponically 9
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 2
WH_XA Root 5
WH_XB Root 10
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|129916|sp|P12783.1|PGKY_WHEAT|PGKY_WHEAT RecName: Full=Phosphoglycerate kinase, cytosolic"
Score 767
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig28166
ACACAGAAGGAAGCAGCACACAAAGATGCAGATCTTAAAACCATACACATCCACGGGGGTACGTTAAATTCCAGTCACATCACTTCACTCGCACAGAGCA
AGTTGATAATTATTCACGACTCATTTACTAGCAAAAATTGGCGACAAGCCTATCTCAAAGTTTCCTTGGGACATATAACGTTCCAGCGTTAGACCAAGAT
GAGATCCCAAACAAAGGGCACGCAGCAAGCTGATAGGTGAAACCGAATCAACCTACGCCTCGTCAAGGGCAAGAACACCTGGGAGGGGCTTGCCTTCCAG
CAGCTCCAAGCTCGCGCCACCGCCGGTCGAAATGTGGCTCATCTTGTCGGCCAGCCCAGCCTTCTCAACAGCAGCAACAGAGTCACCTCCACCGATGATG
GTCGTCACACCCTTCCCAGTAAGCTCAGCCAACTGCTTCGCGATTGCATCAGTGCCTGCGGCAAACTTCTCAAACTCAAAGACTCCCATAGGACCGTTCC
AGATAACAGTCTTGGTGGTGTCCAAGGCTTCTGCGAAAGTCTTGATGGAATCTGGACCAACATCCAGACCCATCCAACCATCAGGGATAGCAGTGGCAGG
AACAATCTTGCTTTCAGCATCTGCTGCAAACTTGTCAGCCACAACAACATCTGTCGGTAGCAAGAGCTTAACACCCTTGGACTTTGCCGTTTCAATCAGT
GAAGTTGCCAGTTCAAGTTTGTCTTCCTCCACAAGGGACTTCCCAACAGGTAATCCCTGGGCCTTGTAGAATGTGAAGATCATACCACCACCAAGGATGA
GGATATCAACCTTGGCCAGCAGAGACTCGATCACACCAATCTTAGATGAGACCTTGGATCCACCAACAATGGCAGCAAATGGCTTCTTTGGGTTGGCAAC
AGCTCCGACAAGATAGTCAAGTTCCTTCTGCATGAGGAAGCCAGCAACAGAAGGCCTCAAAAACTTGGTTACACCCTCGGTTGAAGCATGAGCCCTATGT
GCAGTGCCGAAAGCATCATTTACGTAAAGGTCAGCAACCGATGCAAGCTTCTTAGCAAACTCAGGATCATTCTTCTCTTCCTCCTTGTAGAATCTCACAT
TCTCCAGGAGTAGAACACCGCCATCTGGCAAAGCAGCAGCCAATTTCTCAACTTCTTCACCAATGCAGTCAGGGGCCATCACAACTTCAAGTCCAAGGAG
CTCAGACAGGCGTGGAACAAGAGGCTTCAAGCTGAACTTGGGGGTGACACCTTTTGGGCGGCCCAGATGGCTGGCCAGGATGACCTTGGCACCCTTCTCG
AGGAGGTACTTGATGGTGGGGATGGATGCGCGGATGCGGGTGTCGTCGGTGATCTTCTGGGCGTCGTCGAGCGGCACGTTGAGGTCGGCGCGCACGAACA
CCTTCTTCCCCTTGAGATCCGCCTCCCCGAGGGTGCCCACGCTCCTCTTGGTCGCCATCGCGTCGAGGAACCGGATCGAATCGGCGGCGATCTGGGCGAG
GTGGTCGCTG
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