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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2804  (registered. 2012)
Contig Information
Length 880 bp
Clones alternative view 52 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_h Spike at heading date 1
Wh_DPA20 Seed DPA20 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_PCDAM Anther at meiosis 2
Wh_SHDr Shoot grown with dessication 2
Wh_VWD Shoot grown with dessication 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 6
WH_XN Leaves, plant was grown at constant 23 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 1
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|151935411|gb|ABS18744.1|| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
Score 432
Evalue 2.00E-119
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2804
AGCAACACAAGTATGGCAGGAACAACACAATTACACACGATATTAAGGGTTCACTTATTAATCATCCAACCTCCAAAGCCACTCACATCATTAAGTATGT
AAGCACAACCAAACATAACAGAGATAGAAAGACGACCAAAACAGAAACTGAAAACACCATTGAGTACACCGACGAGACAGAAGCAGCGCCATGAGCAGGC
ACTTACTGGCCACCACGCAGGCGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCGG
CAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAGGACTCCACCTCCAGGGTGAT
GGTCTTGCCGGTGAGCGTCTTGACGAAAATCTGCATGCCTCCACGAAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCCAGG
GTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTTGCCTTCACATTGTCGATGG
TGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCATGCCTCCACGGAGCCTGAGCACCAGGTGGAGGGTAGA
CTCTTTCTGGATGTTATAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC
TGGATCTTGGCCTTCACATTGTCGATGGTGTCCGNNNACTCCACCTCCAGCGTGATGGTCTTGCCAGTGAGGGTCTTGAC
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