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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig28008  (registered. 2012)
Contig Information
Length 1645 bp
Clones alternative view 151 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_dL Crown of seedling 7
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 7
Wh_h Spike at heading date 7
Wh_oh Pistil at heading date 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 8
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_MS Seed DPA5 of DT3DL CS wheat 9
Wh_OKCS Seed DPA5 4
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 3
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 6
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_SP 5
WH_XA Root 4
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218200667|gb|EEC83094.1|| hypothetical protein OsI_28229 [Oryza sativa Indica Group]
Score 306
Evalue 7.00E-81
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig28008
AATGTGCGGACGGAAGGGGGGAAAGAGGGGGAGAAATGAAACAAAGGCTGCAAAGAAACAATGAAATGATACATCATCAGGTCATCTAGAAGGCGTNNNT
GGCGACGGCGGCGGCGGCCAGCACGAAGGCGGGGCGGAGACCAGCGGCGCCGCTGCCCGGGGTGGCGGGCTCGGCGGTGGGCGAGGGCGACATGTCCGGG
GTGGGCGCCGGAGGGGAGGACATCGGGGAGTCGGCGGGCGCCGGTGCGGTGGCGGAGGGCGTGGGGGCGACGGTGGGCGCGGGCGCCGGGGCCGCGGTAG
GGGGCGGGGACACCGGCGCCGGGGTAGGGGGCGCCATTGCCGGGGGCGGGGTCGCCGGCGGGGGAGGCGGGGCCTGGGGCGCTGCCGCGGGAGCCAAAAG
GAGGGGACATGCCCCGCTTCCGACCCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCCGTGAGGGCTCCCACTTATCCTACAC
CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT
GGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT
CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAGCATCCGCGAGGACCATCGCAATG
CTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTTCATGCTCGGGGAAAGCCTCCTCTCAGAGCCTTGCTCCCGC
TTCCCCTCGACGCGCCGCCGCCGCCGCCTCCGAGCCCCTCGACGCCCACCTCGCAGCCATGGCGGAGCAGACCGAGAAGTCTTTCCTCAAGCAGCCAAAG
GTTTTCCTCAGCACGAAAAAGGCCGACAAGGCCAAGAGGCCAGGCAAGGCTGGCAACCGCTTCTGGAAGAGTGTTGGCCTTGGTTTCAAGACCCCAAGGG
AAGCGATCGATGGTACCTACATTGACAAGAAGTGCCCATTCACTGGAACTGTTGCCATCAGGGGCAGAATCATAGCTGGAACCTGCCACAGTGCCAAGAT
GAACAGGACCATCATTGTTCGCAGGAACTACCTTCATTTTGTGAAGAAGTATCAGAGGTATGAGAAGAGGCACTCCAACATCCCAGCTCACATCTCCCCC
TGCTTCCGAGTCAAGGAAGGCGACCATGTCATCATTGGCCAGTGCAGGCCCCTGTCGAAAACCGTGAGATTCAATGTCCTGAAGGTTGTTCCAGCTGGAA
CCACCGGAGGCGGGAAGAAGGCTTTCATCGCTGCTTAAGCCCAGGCTCTGATTCATGAGTAGTTCATAGTCAGACGTTTTAAGCACTTAAACCTACCAGG
CTGCTGCTGTTTTGCGATTTGATTCCTGTGTTTTCTGTCAAACCGAAGAATGTCGTGATCTGAACATGTCTTGTGGAATCTATCTATCATTAATAGTTTT
GCTTAAAATTGTACTCAGTTTTTTCTTTGGTGCTGAAAAAAAAAA
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