Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig27069  (registered. 2012)
Contig Information
Length 885 bp
Clones alternative view 392 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 8
Wh_dL Crown of seedling 15
Wh_e Seed DPA10 6
Wh_f Spike at flowering date 6
Wh_h Spike at heading date 14
Wh_oh Pistil at heading date 4
Wh_r Root 5
Wh_yd Spikelet at late flowering 8
Wh_SH - 1
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 9
Wh_EM Dormant seed with water absorption 6
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 17
Wh_OKCS Seed DPA5 15
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 15
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 5
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 9
Wh_VWD Shoot grown with dessication 5
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23 15
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 5
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 11
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 11
WH_XR Roots, 18 day old plants were grown hydroponically 12
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 23
WH_XA Root 19
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 22
WH_XD Root, treated at 50 microM Al for 6h 15
WH_XE Seedling, infected with leaf rust 8
WH_XF Seedling, infected with leaf rust 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 13
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XV Leaves, plant was grown at constant 23 5
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 4
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|74048999|gb|AAZ95171.1|| eukaryotic translation initiation factor 5A1 [Triticum aestivum]
Score 330
Evalue 2.00E-88
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig27069
TTTTTTTTTTGCAGCAGAGAGTCGAACCACAAATAACCCAAACCAATTCATTCATAGAGATAGGGCGGATGAGCAAACCGGAATCTAAGTTCCAGCAACC
ACTCAGTTCCAATTCCAAAGGGTATTATAATAGAGATAGATAGATAGATAACAAAGTACTAGCAGCACCTCGAGCATTCGGTGTAAAAAACACACAAATC
TGGATCAAACTTGTTTCACCCAACAGATATCTTGATGCCTATGTATGTGTATCTCAAACACCCAGAAGCACTAGATACCAAGTATCGCAGGTAGGCAACC
ACGCACAGCTGCTTACTTGCCACCACCGATTTCCTTCACAGCGCAGATCTGTTCTTCACCCATGGCGGACATCACAGACAGGATCAGGTCCTTGCCATCA
GCAAATCCAGTCTTGATCTGGCCAAGCAGAACATCATCAGTGGGAAGCTTCAGGTCATCCTTAGTGTTGCCACTCTCAGTTAGAAGGCTGACATATCCAT
CATCAGTTATGTCAATCAGCTGATAATCTTGGCGGTCAACATGGGGGACGTCACAGTTGTGGGATGAAGGAACGATATCCTCAAGCTTCTTTCCATTAAA
GATGTCAATGGCAACAAAGTGACACTTTGCGTGACCATGCTTCCCAGTCTTGGAGGTGGAGACCTCAACAACCTTGCAGGGACGGGCCTTGATGACGATG
TGTCCACCCTTGCGGATGGCGCCGGCCTGCTGAGGGTAGGTCTTGGAGGCGCCGGAGTCGGCCTTGGACTCGAAGTGGTGCTCATCGGTGTCCGACATCT
CCGACGATCCTCCTGGGTCCGGGGGCAAGTGGGGTGGTGGAGACGAGATGCAGCGGCAGCGAGGGGCGGATGGATGGATCCGGAG
page-top